Nagk Protein
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-8
GLU-9
8.6
8.4
15.2
-19.0
67.9
62.7
-44.6
GLU-9
GLY-10
8.0
8.4
6.8
-33.4
100.6
101.9
130.8
GLY-10
GLY-11
10.7
11.3
143.2
-159.1
78.1
102.6
26.8
GLY-11
GLY-12
11.8
13.0
177.3
175.7
53.4
44.6
-123.5
GLY-12
THR-13
15.1
14.5
0.3
-14.8
90.7
68.8
-123.4
THR-13
ARG-14
17.5
16.2
-37.2
104.9
59.3
92.9
76.7
ARG-14
SER-15
15.9
13.8
-19.9
-6.7
66.4
24.3
177.6
SER-15
GLU-16
13.3
13.4
-17.0
-23.1
115.7
106.6
-152.0
GLU-16
VAL-17
12.1
12.2
10.2
-18.4
132.1
134.1
53.8
VAL-17
LEU-18
11.8
11.8
-5.8
3.9
127.1
126.2
-17.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-71
GLY-72
7.9
7.8
1.2
-3.0
85.2
81.4
53.3
GLY-72
LEU-73
4.6
4.5
-3.8
2.0
115.3
116.1
-54.5
LEU-73
SER-74
6.1
5.6
2.6
8.6
68.2
64.5
31.4
SER-74
LEU-75
5.5
5.0
15.1
-12.6
104.3
97.0
-23.6
SER-74
LEU-75
5.5
5.0
15.1
-12.6
104.3
97.0
-23.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-74
LEU-75
5.5
5.0
15.1
-12.6
104.3
97.0
-23.6
SER-74
LEU-75
5.5
5.0
15.1
-12.6
104.3
97.0
-23.6
LEU-75
SER-76
9.1
8.5
-13.8
-22.7
81.5
77.4
-12.4
SER-76
GLY-77
12.0
11.0
-37.5
-127.4
161.5
138.6
-1266.0
GLY-77
GLY-78
12.9
12.4
-69.3
149.8
131.9
85.3
469.7
GLY-78
ASP-79
9.3
15.9
-74.7
-19.8
118.3
144.7
1471.3
ASP-79
GLN-80
10.2
16.0
120.0
-2.5
34.4
66.7
-2088.8
GLN-80
GLU-81
12.4
12.8
-52.4
-31.6
141.9
152.7
2234.2
GLU-81
ASP-82
10.7
14.7
83.3
45.9
58.6
51.9
-1091.4
ASP-82
ALA-83
12.3
11.4
138.1
-29.9
119.5
51.3
369.7
ALA-83
GLY-84
12.5
12.6
49.3
-5.9
95.3
121.7
-46.1
GLY-84
ARG-85
8.8
9.4
15.0
-1.4
33.6
40.0
25.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-104
THR-105
4.5
4.0
-5.6
24.0
116.6
116.3
8.9
THR-105
THR-106
4.8
4.2
10.9
-22.8
47.3
56.2
23.1
THR-106
ASP-107
7.2
6.9
8.8
-13.3
32.2
22.8
-36.8
ASP-107
ALA-108
7.4
7.1
3.7
4.6
54.3
57.8
51.4
ALA-108
ALA-109
7.4
7.4
-5.5
-13.2
78.8
78.9
-18.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-309
SER-310
5.7
5.7
-7.3
3.6
128.5
130.3
-32.0
SER-310
SER-311
6.3
6.2
5.6
0.3
53.3
54.1
40.3
SER-311
ALA-312
3.9
3.7
6.5
-1.7
30.3
34.9
38.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-328
MET-329
12.9
13.3
14.7
-15.6
51.3
54.3
8.8
MET-329
ASP-330
10.2
10.7
-0.9
5.1
154.0
159.9
109.2
ASP-330
TYR-331
10.4
10.9
-13.4
4.2
107.9
114.4
-66.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees