Proto-Oncogene Tyrosine-Protein Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-137   VAL-138  7.8 7.9 0.1 -0.1 46.9 46.6 0.4
 VAL-138   ASN-139  11.3 11.3 -0.6 -0.7 116.6 115.5 -4.6
 ASN-139   SER-140  11.4 11.5 14.8 -14.4 69.3 71.5 -9.7
 SER-140   LEU-141  8.5 8.5 0.4 1.1 18.0 16.2 83.8
 LEU-141   GLU-142  7.8 7.8 0.2 -0.2 77.4 77.5 -0.3
 GLU-142   LYS-143  5.1 5.1 -0.1 0.3 91.6 91.6 1.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-230   THR-231  9.9 9.9 -0.1 -0.1 159.5 159.6 -2.7
 THR-231   LEU-232  11.8 11.8 -0.2 0.6 130.1 130.0 -1.7
 LEU-232   HIS-233  10.3 10.3 0.2 -3.0 73.7 73.7 108.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees