Elongation Factor Tu

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-213   VAL-214  20.4 18.2 -119.6 30.4 98.1 85.5 -48.3
 VAL-214   ARG-215  22.2 20.2 36.0 -53.3 140.0 153.8 88.9
 ARG-215   ASP-216  20.0 20.2 81.1 -85.8 94.5 86.0 73.7
 ASP-216   VAL-217  21.6 20.7 31.2 -22.2 92.6 123.1 -51.5
 VAL-217   ASP-218  20.0 19.1 29.0 19.7 109.5 102.1 -73.7
 ASP-218   LYS-219  23.5 22.7 8.3 -40.3 165.2 160.8 236.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-221   LEU-222  17.8 17.0 18.8 -32.0 145.2 132.9 118.6
 LEU-222   MET-223  16.3 15.2 -30.8 24.8 107.8 103.2 -18.6
 MET-223   PRO-224  12.6 11.6 -5.4 4.9 35.7 45.3 -21.5
 PRO-224   VAL-225  11.6 11.1 -42.8 38.3 86.2 91.7 41.4
 PRO-224   VAL-225  11.6 11.1 -42.8 38.3 86.2 91.7 41.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-224   VAL-225  11.6 11.1 -42.8 38.3 86.2 91.7 41.4
 PRO-224   VAL-225  11.6 11.1 -42.8 38.3 86.2 91.7 41.4
 VAL-225   GLU-226  8.0 7.6 -25.7 6.7 98.9 95.0 -17.6
 GLU-226   ASP-227  6.9 6.5 10.5 -1.3 67.1 77.2 -33.1
 ASP-227   VAL-228  3.3 2.7 9.8 -17.8 87.2 82.1 51.6
 VAL-228   PHE-229  0.9 1.3 2.3 -16.5 88.7 87.8 2.3
 PHE-229   THR-230  3.5 4.6 -23.9 17.5 77.9 82.5 -51.7
 THR-230   ILE-231  7.0 8.2 -22.6 1.2 35.2 36.1 15.9
 ILE-231   THR-232  8.8 9.2 -51.1 82.3 105.9 78.3 14.0
 THR-232   GLY-233  12.3 13.0 143.2 -176.1 103.9 118.9 -24.5
 GLY-233   ARG-234  14.3 15.6 15.5 -38.5 88.8 87.8 -18.8
 ARG-234   GLY-235  12.3 14.1 -63.9 95.0 146.7 148.8 189.2
 GLY-235   THR-236  10.6 11.9 67.5 -86.9 80.1 77.5 -36.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-241   ILE-242  10.2 9.7 -31.6 8.8 82.4 67.8 2.8
 ILE-242   GLU-243  12.5 12.0 27.3 -12.0 82.2 73.3 23.2
 GLU-243   ARG-244  15.9 15.6 -9.4 18.1 123.8 124.1 72.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-245   LYS-246  18.4 16.9 56.2 -105.6 123.2 146.1 199.8
 LYS-246   VAL-247  16.4 14.7 -18.8 -3.5 128.4 109.2 -98.5
 VAL-247   LYS-248  14.7 13.8 -35.0 41.4 45.5 55.2 -4.9
 LYS-248   VAL-249  15.6 15.2 -34.7 25.2 127.3 134.2 -86.8
 VAL-249   GLY-250  15.3 14.4 19.6 -22.0 72.7 70.0 -73.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-256   GLY-257  14.4 14.7 136.4 -96.5 41.1 66.6 244.3
 GLY-257   LEU-258  13.2 12.9 27.6 -72.1 48.6 41.4 -172.3
 LEU-258   ALA-259  11.0 10.1 -55.4 67.3 129.5 120.9 -1.4
 ALA-259   PRO-260  11.2 10.0 -18.0 7.1 112.9 118.1 57.4
 PRO-260   GLU-261  13.9 12.6 0.7 -5.5 133.0 120.7 33.4
 GLU-261   THR-262  15.8 15.6 5.6 16.5 157.5 167.9 -264.6
 THR-262   ARG-263  15.7 16.1 -81.9 76.9 79.2 70.0 61.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-264   THR-265  16.9 16.8 -17.0 10.3 72.2 66.2 -55.3
 THR-265   VAL-266  16.1 16.0 31.9 -29.5 172.0 165.1 13.6
 VAL-266   VAL-267  16.3 16.0 6.2 -10.2 120.1 124.5 -9.5
 VAL-267   THR-268  13.7 13.6 -112.9 72.2 121.3 129.2 -209.0
 VAL-267   THR-268  13.7 13.6 -112.9 72.2 121.3 129.2 -209.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-267   THR-268  13.7 13.6 -112.9 72.2 121.3 129.2 -209.0
 VAL-267   THR-268  13.7 13.6 -112.9 72.2 121.3 129.2 -209.0
 THR-268   GLY-269  13.6 14.6 70.1 -23.3 40.5 80.1 241.3
 GLY-269   VAL-270  10.9 11.1 -36.6 -15.7 92.2 100.9 68.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-273   ARG-274  0.8 0.5 153.2 148.4 94.2 100.3 127.5
 ARG-274   LYS-275  3.3 3.4 36.4 -27.5 102.6 146.8 94.3
 LYS-275   THR-276  4.0 3.8 -80.1 65.9 116.2 96.2 -15.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-280   ILE-281  11.6 10.5 17.9 -7.0 92.4 96.8 -27.3
 ILE-281   ALA-282  13.8 13.1 50.1 6.5 115.2 113.4 -102.0
 ALA-282   GLY-283  15.3 14.9 3.6 -61.7 59.6 90.0 -53.1
 GLY-283   ASP-284  13.5 13.3 24.3 -3.7 83.9 71.0 75.0
 ASP-284   ASN-285  9.9 9.9 -29.7 44.2 32.7 37.7 -56.8
 ASN-285   VAL-286  7.4 7.3 -36.1 61.6 90.3 94.6 49.5
 VAL-286   GLY-287  5.4 6.2 36.7 -79.6 143.4 132.1 307.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-290   ARG-291  10.6 11.9 7.9 -4.0 65.5 58.6 66.0
 ARG-291   GLY-292  13.8 15.1 -33.2 46.1 177.1 166.1 168.1
 GLY-292   VAL-293  14.5 14.9 -29.6 15.4 128.4 119.3 -88.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-298   GLU-299  6.0 6.3 -19.3 22.0 85.3 95.2 87.8
 GLU-299   ARG-300  4.3 3.8 -8.1 13.1 116.5 115.2 18.6
 ARG-300   GLY-301  6.2 5.3 2.9 14.6 123.5 122.3 -57.0
 GLY-301   GLN-302  9.7 8.8 -48.0 35.5 88.5 100.6 -67.3
 GLN-302   VAL-303  10.4 10.5 20.4 -9.8 18.1 21.4 115.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-304   ALA-305  12.8 12.3 -19.9 -11.4 66.2 62.8 116.7
 ALA-305   LYS-306  16.6 16.0 -36.5 20.4 77.5 98.1 -59.5
 LYS-306   PRO-307  19.4 18.5 17.0 8.9 26.2 39.3 131.8
 PRO-307   GLY-308  20.8 21.1 -31.4 49.0 102.7 86.0 0.0
 GLY-308   SER-309  23.3 23.1 -22.1 17.1 62.3 75.3 7.5
 SER-309   ILE-310  22.9 21.4 -165.5 102.5 124.5 146.1 -421.7
 ILE-310   THR-311  21.6 21.8 -36.5 72.0 162.4 141.6 352.6
 THR-311   PRO-312  21.5 21.1 40.4 -21.7 69.4 60.6 96.8
 PRO-312   HIS-313  19.1 18.6 -7.8 -16.0 133.8 138.1 -147.6
 HIS-313   THR-314  20.9 19.9 -9.4 10.3 125.9 126.5 -58.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees