Atp-Dependent DNA Helicase Q1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-277   THR-278  6.4 6.8 8.0 -11.9 32.5 32.7 -55.9
 THR-278   ALA-279  5.4 5.5 7.9 -7.3 83.9 75.6 80.9
 ALA-279   SER-280  4.4 4.5 18.5 -18.4 8.0 9.5 -13.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees