Bovine Mitochondrial F1-Atpase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-130   GLU-131  8.4 7.4 34.2 -44.2 105.7 92.0 -2.5
 GLU-131   ILE-132  9.6 8.8 -13.6 21.8 55.4 60.3 24.4
 ILE-132   LEU-133  8.2 8.2 7.5 -31.4 148.1 152.2 80.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-170   ASN-171  9.8 9.0 25.0 -10.8 97.5 91.6 17.7
 ASN-171   ASN-172  13.6 12.8 -30.6 17.0 21.8 27.2 26.1
 ASN-172   VAL-173  14.0 13.3 20.0 -51.3 110.7 110.8 42.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-329   ASP-330  5.7 5.8 4.8 17.6 26.3 25.3 63.7
 ASP-330   ALA-331  3.0 3.2 -9.3 16.9 99.5 101.0 2.5
 ALA-331   THR-332  3.4 3.0 -28.6 15.3 37.1 46.9 59.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees