Methionyl-Trna Fmet Formyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 HIS-110   GLY-111  3.1 3.3 -1.4 -2.4 42.6 43.3 35.4
 GLY-111   SER-112  3.7 3.9 8.4 -4.6 80.2 74.3 23.7
 SER-112   LEU-113  4.2 4.3 -2.7 -6.9 106.7 106.7 -46.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-134   GLY-135  7.2 7.3 -4.5 -18.6 104.0 101.1 -80.3
 GLY-135   VAL-136  3.8 3.6 -12.7 22.6 52.3 44.7 -47.6
 VAL-136   THR-137  0.9 0.5 15.4 -26.8 131.5 134.1 124.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-139   GLN-140  5.2 5.4 8.0 -4.2 57.3 57.6 21.6
 GLN-140   MET-141  7.6 7.8 1.8 -2.2 57.6 52.7 44.7
 MET-141   ASP-142  7.1 7.2 -16.8 16.0 173.1 169.9 -72.3
 ASP-142   VAL-143  6.0 6.3 22.3 -10.5 74.3 71.5 68.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-144   LEU-145  4.9 6.6 63.6 -59.0 17.5 17.2 50.6
 LEU-145   ASP-146  6.0 6.4 0.6 -5.7 57.2 56.6 -45.6
 ASP-146   THR-147  3.2 3.7 6.6 2.6 117.9 121.8 -16.6
 THR-147   GLY-148  0.5 1.2 -7.2 5.5 93.6 95.3 16.6
 GLY-148   ASP-149  3.3 3.6 -2.3 -1.9 119.0 118.1 -28.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-151   TYR-152  8.9 8.6 -11.4 13.4 154.1 153.3 18.3
 TYR-152   LYS-153  8.2 7.8 1.7 7.7 72.8 72.0 24.0
 LYS-153   LEU-154  6.3 5.8 23.9 -27.2 18.6 11.1 -44.7
 LEU-154   SER-155  6.0 5.3 -3.3 -13.9 96.7 97.4 12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-172   GLU-173  5.3 5.1 16.5 -15.1 58.5 60.5 -6.6
 GLU-173   LEU-174  3.6 3.6 -7.8 1.4 55.5 45.7 95.5
 LEU-174   GLY-175  2.6 3.0 -6.6 15.8 43.6 44.9 -47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-193   GLU-194  11.0 11.1 18.3 -5.4 67.0 70.2 90.3
 GLU-194   VAL-195  10.1 9.8 23.9 -28.9 56.3 48.5 -19.1
 VAL-195   GLN-196  8.0 7.8 13.2 -13.8 107.6 105.8 -18.7
 GLN-196   ASP-197  6.5 6.0 -8.4 5.4 127.1 125.5 -23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees