Endo-1,4-Beta-Xylanase A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-8   TRP-9  3.4 3.5 -6.3 -6.3 41.2 39.3 145.3
 TRP-9   THR-10  6.7 6.8 -3.4 0.6 94.3 95.3 30.8
 THR-10   ASP-11  9.4 9.4 -2.6 1.9 39.3 33.8 -8.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-20   GLY-21  4.6 4.5 -5.6 1.9 64.6 59.5 93.0
 GLY-21   SER-22  7.2 6.9 0.3 0.0 104.2 100.7 -23.4
 SER-22   GLY-23  9.6 9.2 -0.6 -6.3 52.6 58.2 98.6
 GLY-23   GLY-24  9.3 8.9 1.2 2.8 82.4 87.8 6.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-29   TRP-30  11.4 11.4 -1.8 0.9 37.8 40.3 47.1
 TRP-30   SER-31  12.9 12.9 -0.1 5.8 90.2 90.2 -111.7
 SER-31   ASN-32  16.4 16.4 -14.2 -4.7 44.2 52.8 269.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-36   VAL-37  11.0 11.0 -2.6 -0.4 37.7 37.8 11.0
 VAL-37   VAL-38  8.9 8.8 2.9 -6.8 86.8 85.1 21.2
 VAL-38   GLY-39  5.2 5.2 -7.3 -2.1 35.7 30.4 130.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-57   TRP-58  9.0 9.1 0.0 -6.8 109.8 105.2 83.0
 TRP-58   ALA-59  10.0 10.1 4.7 -4.1 92.5 91.3 80.4
 ALA-59   PRO-60  13.4 13.6 1.7 -1.5 144.7 143.2 38.6
 PRO-60   ASN-61  14.9 14.9 16.2 -9.4 84.1 85.6 665.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-64   TYR-65  14.6 14.7 -28.1 -7.4 46.4 37.5 569.2
 TYR-65   LEU-66  12.8 12.9 -1.7 10.0 78.0 81.8 -134.2
 LEU-66   THR-67  9.7 9.7 0.2 1.4 103.6 103.1 2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-169   ALA-170  6.2 6.4 -2.0 -0.4 57.3 58.4 15.9
 ALA-170   THR-171  6.6 6.7 3.2 6.1 70.8 72.8 157.6
 THR-171   GLU-172  7.8 8.0 3.7 -16.5 143.0 143.1 199.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-177   GLY-178  16.8 16.7 -10.2 -5.3 28.2 29.5 253.0
 GLY-178   SER-179  14.7 14.7 9.0 6.9 87.1 84.5 -94.4
 SER-179   SER-180  11.8 11.9 -5.3 0.4 49.1 52.7 67.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees