Glutamate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-7
GLU-8
20.5
20.6
-10.6
18.4
16.8
19.0
-99.4
GLU-8
MET-9
20.7
20.8
-8.6
0.0
76.4
79.0
137.5
MET-9
ALA-10
18.6
18.9
5.5
-4.0
72.8
70.0
-3.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-13
LEU-14
12.6
12.9
11.0
-0.4
90.2
95.1
-69.0
LEU-14
GLU-15
11.1
11.2
-11.2
6.4
159.3
157.8
-76.2
GLU-15
ARG-16
12.0
11.9
-9.6
7.6
119.6
122.9
-174.9
ARG-16
ALA-17
9.8
10.4
5.0
-32.3
105.4
102.9
192.2
ALA-17
ALA-18
6.9
7.2
30.9
-11.4
57.8
77.1
149.9
ALA-18
GLN-19
7.7
7.6
-3.6
24.3
150.1
149.3
300.2
GLN-19
TYR-20
6.1
6.2
-18.9
12.1
85.8
84.7
-117.9
TYR-20
MET-21
2.6
2.6
12.9
-5.9
112.4
115.7
-176.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-190
THR-191
10.9
10.9
-8.2
1.6
11.0
14.9
131.1
THR-191
ALA-192
12.4
12.4
3.7
-3.8
107.2
109.1
-29.0
ALA-192
GLN-193
15.3
15.2
3.8
-4.7
89.4
89.4
21.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-348
THR-349
6.6
6.6
9.3
-15.1
106.2
103.9
102.4
THR-349
VAL-350
3.7
3.8
-1.0
8.4
6.5
8.9
-208.5
VAL-350
SER-351
4.9
5.0
-7.4
3.5
63.9
61.8
179.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-371
LYS-372
11.4
11.4
-4.2
-5.6
56.5
54.9
166.7
LYS-372
LEU-373
8.0
8.0
3.8
-6.2
139.6
135.6
64.5
LEU-373
ASP-374
7.5
7.5
7.9
-6.9
135.1
135.9
-35.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-378
LYS-379
10.6
10.6
-3.7
7.6
130.1
131.6
109.8
LYS-379
ALA-380
8.9
8.9
0.3
-11.8
49.7
49.2
-302.1
ALA-380
PHE-381
5.9
5.9
12.2
-7.2
42.1
45.4
173.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-383
VAL-384
7.2
7.0
6.6
-14.9
134.0
133.8
233.4
VAL-384
TYR-385
5.8
5.9
6.1
-13.3
128.5
131.2
159.8
TYR-385
ASN-386
9.4
9.4
-0.7
11.1
42.9
44.6
-291.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-399
TYR-400
4.0
3.9
-4.2
9.9
91.2
91.6
23.6
TYR-400
VAL-401
4.2
4.3
5.7
-11.0
73.1
74.6
60.9
VAL-401
VAL-402
1.6
1.6
-0.2
0.8
39.5
37.7
-115.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees