1-Deoxy-D-Xylulose-5-Phosphate Reductoisomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-184   GLY-185  2.8 2.9 -1.1 45.3 59.1 67.3 -557.4
 GLY-185   SER-186  1.3 0.8 173.2 -4.1 82.5 54.2 693.2
 SER-186   GLY-187  3.9 4.2 12.3 -0.7 106.4 105.0 -28.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-207   ARG-208  15.3 15.5 27.2 -5.1 167.9 167.8 -213.5
 ARG-208   HIS-209  15.8 15.8 36.9 -72.5 115.2 114.1 157.3
 HIS-209   PRO-210  12.2 13.1 3.6 -23.0 177.0 149.3 210.5
 PRO-210   ASN-211  11.5 12.5 -40.0 74.4 60.6 86.5 -92.3
 ASN-211   TRP-212  9.9 10.4 -62.7 41.9 112.8 122.3 -117.5
 TRP-212   SER-213  11.3 11.7 12.4 -16.0 59.0 62.8 -22.9
 SER-213   MET-214  14.8 15.0 -39.6 48.9 143.4 158.6 53.8
 MET-214   GLY-215  14.2 14.1 1.4 -10.2 40.1 55.0 -1.9
 GLY-215   ARG-216  15.4 15.7 16.1 -0.8 75.7 80.9 -37.2
 ARG-216   LYS-217  15.3 15.5 3.1 1.9 61.4 56.4 19.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-225   MET-226  5.2 5.1 7.4 -10.7 36.5 35.0 32.2
 MET-226   ASN-227  3.8 3.8 1.4 0.3 110.0 106.0 -35.6
 ASN-227   LYS-228  3.3 3.3 -1.9 -3.4 68.7 71.1 48.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-316   CYS-317  10.4 10.5 -4.0 3.3 66.2 65.6 -9.2
 CYS-317   LEU-318  6.9 7.0 1.4 1.6 68.4 70.2 -7.4
 LEU-318   LYS-319  5.5 5.8 -1.3 -3.3 61.4 59.5 45.9
 LYS-319   LEU-320  8.5 8.7 5.9 2.6 160.4 160.2 -88.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-323   ALA-324  9.1 9.3 -0.1 6.9 38.8 45.0 -60.2
 ALA-324   PHE-325  6.4 6.4 3.9 3.6 87.2 86.3 8.2
 PHE-325   GLU-326  7.8 8.1 -2.1 0.3 72.8 58.8 13.9
 GLU-326   GLN-327  11.2 11.3 13.9 -19.8 175.4 173.5 37.8
 GLN-327   GLY-328  10.2 9.6 19.6 -23.6 116.9 110.1 24.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees