Serine/threonine-Protein Kinase/endoribonuclease Ire1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-793   CYS-794  8.7 8.3 39.2 5.4 23.4 52.1 286.3
 CYS-794   LEU-795  9.9 9.8 -10.7 6.2 146.1 152.7 -31.8
 LEU-795   HIS-796  7.4 7.5 8.6 3.1 87.6 85.0 62.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-797   GLU-798  9.2 9.5 -10.0 10.4 25.2 30.3 56.2
 GLU-798   LYS-799  10.9 11.1 13.6 -14.5 135.8 137.5 28.5
 LYS-799   HIS-800  9.2 9.4 -1.2 7.5 75.1 75.9 -19.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-802   VAL-803  5.3 5.5 -1.4 7.1 71.7 72.2 -28.6
 VAL-803   ILE-804  4.1 4.3 -4.0 2.6 102.2 99.5 -10.1
 ILE-804   ALA-805  0.9 1.0 -5.5 0.1 49.6 50.5 48.7
 ALA-805   ARG-806  2.2 2.4 4.0 -2.1 152.4 154.2 -22.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-831   PHE-832  4.4 4.2 -0.3 -4.5 128.8 131.3 -8.3
 PHE-832   TRP-833  7.3 7.1 4.0 1.8 12.8 14.0 67.5
 TRP-833   SER-834  5.5 5.4 0.2 5.0 64.6 61.5 4.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-955   LEU-956  19.2 19.2 -3.6 -4.5 70.7 76.0 12.2
 LEU-956   PHE-957  16.1 15.9 0.5 5.5 45.6 42.1 -10.3
 PHE-957   GLN-958  14.5 14.4 -21.3 25.0 119.0 121.2 7.0
 GLN-958   PRO-959  15.7 16.0 -21.9 15.9 85.2 90.9 1.0
 PRO-959   TYR-960  12.6 13.2 -9.1 13.6 140.1 135.3 -0.8
 TYR-960   TYR-961  10.8 10.7 0.1 14.8 24.3 15.7 123.1
 TYR-961   PHE-962  13.4 13.0 -2.0 12.4 92.4 100.3 70.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees