Hyaluronate Lyase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-342   PHE-343  19.7 19.9 11.7 -1.8 106.7 95.0 -56.2
 PHE-343   LYS-344  17.0 17.3 -16.7 9.2 98.8 90.3 -5.9
 LYS-344   ALA-345  13.2 13.6 -0.6 -0.1 148.7 156.0 -21.4
 ALA-345   LEU-346  11.5 11.7 -12.2 -5.8 77.9 85.3 12.1
 LEU-346   GLY-347  10.5 10.7 21.0 19.8 34.3 25.6 203.6
 GLY-347   GLY-348  9.5 11.0 -33.9 -5.0 155.5 149.3 -230.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-377   GLU-378  2.8 3.2 3.3 3.5 112.2 108.7 12.8
 GLU-378   GLN-379  0.6 1.0 -4.9 -3.0 53.5 57.5 68.1
 GLN-379   VAL-380  3.3 4.0 13.8 2.4 65.9 54.8 72.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-417   GLN-418  3.8 3.6 -13.3 7.7 54.5 54.7 -25.4
 GLN-418   LEU-419  1.3 1.2 -11.3 18.8 116.6 123.9 59.9
 LEU-419   LEU-420  1.6 1.9 5.2 -20.7 74.0 74.6 11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-429   ILE-430  9.5 8.6 -3.1 3.1 48.9 45.8 -11.0
 ILE-430   ASP-431  7.1 6.4 20.9 -38.0 108.3 94.4 23.1
 ASP-431   LYS-432  9.2 9.1 0.6 11.5 58.5 59.6 54.2
 LYS-432   ASP-433  11.7 11.0 -27.5 12.2 65.5 59.9 13.2
 ASP-433   LYS-434  11.5 12.0 -12.6 13.7 103.3 77.4 3.9
 LYS-434   MET-435  8.4 8.4 9.5 -21.5 18.7 36.5 -100.2
 MET-435   GLN-436  9.5 8.1 39.2 0.5 89.9 75.5 42.1
 GLN-436   THR-437  12.9 11.8 -4.3 16.6 78.5 90.0 -12.8
 THR-437   MET-438  11.6 11.3 15.4 -4.7 32.5 27.6 58.9
 MET-438   TYR-439  10.3 10.5 6.2 -9.7 61.9 63.8 34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees