Glycogen Phosphorylase b (E.C.2.4.1.1)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-243
TRP-244
9.8
10.0
25.6
-32.0
167.2
171.1
-4.4
TRP-244
SER-245
8.6
8.5
-11.7
2.1
71.5
73.9
31.1
SER-245
ALA-246
6.7
6.3
1.4
3.0
148.7
155.8
-12.1
ALA-246
LYS-247
4.4
4.5
8.9
1.3
142.2
132.7
-17.5
LYS-247
ALA-248
5.4
5.2
-3.7
-7.1
37.9
44.3
32.7
ALA-248
PRO-249
3.6
3.3
-5.5
4.5
46.4
38.4
-4.7
PRO-249
ASN-250
6.0
5.4
-41.3
-22.9
45.9
52.6
105.4
ASN-250
ASP-251
6.4
5.4
98.8
-10.1
151.4
161.4
-199.6
ASP-251
PHE-252
4.8
4.8
23.1
43.7
92.6
119.5
-8.5
PHE-252
ASN-253
3.5
1.5
-1.1
-7.1
99.3
24.5
105.2
ASN-253
LEU-254
0.4
3.0
-30.9
53.0
36.4
42.0
-76.2
LEU-254
LYS-255
0.9
2.2
-29.0
20.5
52.7
108.4
51.7
LYS-255
ASP-256
3.4
4.5
-98.6
48.9
56.4
89.7
47.3
ASP-256
PHE-257
5.9
6.9
142.6
144.1
157.8
141.9
107.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-275
SER-276
1.9
2.1
28.8
-18.0
144.6
135.1
-11.3
SER-276
ARG-277
1.2
1.2
-19.8
-6.7
78.9
70.6
7.4
ARG-277
VAL-278
4.0
4.3
-14.3
55.7
16.6
22.9
-93.3
VAL-278
LEU-279
4.3
4.9
-28.5
9.9
55.9
49.7
58.4
LEU-279
TYR-280
3.0
3.3
28.2
-67.1
102.8
92.2
19.3
TYR-280
PRO-281
6.0
6.4
-111.7
85.0
13.5
34.4
73.6
PRO-281
ASN-282
7.1
6.6
95.4
64.0
133.7
96.2
-217.4
ASN-282
ASP-283
8.5
9.5
81.0
100.7
126.7
116.2
398.9
ASP-283
ASN-284
7.5
12.5
-62.3
104.9
66.2
90.6
-29.6
ASN-284
PHE-285
10.0
13.4
158.6
-106.6
61.9
14.3
113.2
PHE-285
PHE-286
12.2
12.8
36.7
-14.3
25.8
68.2
-32.5
PHE-286
GLU-287
13.2
15.8
-40.4
-152.2
129.7
147.5
-459.6
GLU-287
GLY-288
13.8
16.8
11.8
32.6
36.3
74.0
77.8
GLY-288
LYS-289
15.1
15.3
10.5
38.3
33.6
14.7
103.7
LYS-289
GLU-290
12.9
13.3
3.7
-9.5
56.9
63.1
-19.4
GLU-290
LEU-291
11.9
12.5
27.6
-18.4
96.4
88.8
4.5
LEU-291
ARG-292
8.3
8.8
-4.5
5.6
42.0
43.2
2.3
ARG-292
LEU-293
8.2
8.7
-6.1
1.0
102.0
106.2
-22.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees