Lactose Operon Repressor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-71   ALA-72  19.9 19.6 6.9 -10.6 89.6 90.4 -38.8
 ALA-72   LEU-73  21.6 21.3 6.1 -0.1 75.1 82.3 35.3
 LEU-73   HIS-74  18.5 18.1 7.2 21.2 11.4 14.2 270.8
 HIS-74   ALA-75  18.5 17.4 -41.0 15.9 115.9 114.9 -175.8
 ALA-75   PRO-76  14.8 13.8 1.3 2.0 90.7 91.7 -31.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-77   GLN-78  18.2 17.7 -4.4 8.8 17.9 21.6 -48.8
 GLN-78   ILE-79  16.4 15.8 -2.4 -5.4 81.2 78.8 86.9
 ILE-79   VAL-80  13.7 13.3 -3.5 0.5 81.8 83.4 44.1
 VAL-80   ALA-81  16.7 16.3 0.1 11.9 157.2 155.7 -111.4
 ALA-81   ALA-82  18.1 17.8 -12.8 4.8 46.4 43.6 55.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-159   ILE-160  4.8 4.5 9.5 -17.3 115.3 113.8 50.6
 ILE-160   PHE-161  2.0 1.9 3.9 2.6 53.4 52.9 46.7
 PHE-161   SER-162  3.1 3.2 2.5 -4.7 117.2 113.8 51.0
 SER-162   HIS-163  4.7 4.8 -15.9 15.4 54.8 58.7 -27.9
 HIS-163   GLU-164  6.7 6.8 -1.2 3.1 92.7 93.6 23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-290   GLN-291  12.2 11.9 -5.1 0.0 100.8 102.6 24.6
 GLN-291   ASP-292  9.2 9.3 -13.1 3.3 53.6 57.9 88.9
 ASP-292   PHE-293  9.0 9.1 -9.3 11.8 110.9 114.0 41.8
 PHE-293   ARG-294  10.5 10.3 -2.4 -4.9 44.9 51.5 -56.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-315   ASN-316  10.8 10.9 -22.2 -30.9 100.0 90.2 -24.0
 ASN-316   GLN-317  7.1 7.2 -5.2 -0.3 160.6 150.7 51.2
 GLN-317   LEU-318  5.1 5.1 -1.3 -3.3 77.6 80.0 50.4
 LEU-318   LEU-319  2.2 2.5 -4.2 -1.3 149.6 148.4 -77.2
 LEU-319   PRO-320  1.1 1.1 -7.1 6.0 87.6 96.3 72.5
 PRO-320   VAL-321  4.7 4.5 -8.3 -1.4 78.1 76.4 31.9
 VAL-321   SER-322  7.8 7.7 3.2 -11.2 60.8 58.9 -23.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees