Atp-Citrate Lyase Alpha-Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-399   GLU-400  3.1 3.3 -6.3 4.2 60.5 59.7 54.4
 GLU-400   GLU-401  3.0 3.2 -2.3 -2.2 38.0 41.5 -3.5
 GLU-401   SER-402  1.4 1.4 -0.2 5.6 109.6 111.0 106.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-403   ILE-404  3.0 2.8 -7.0 7.7 145.8 144.8 -0.8
 ILE-404   ILE-405  3.9 3.8 -2.6 0.1 110.8 110.3 9.2
 ILE-405   LYS-406  4.8 4.8 1.9 -1.7 120.1 121.2 13.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-445   ILE-446  21.9 22.1 0.6 2.2 90.5 92.2 11.0
 ILE-446   GLY-447  18.2 18.3 -5.5 4.7 35.1 30.8 33.4
 GLY-447   PRO-448  16.1 16.5 -0.1 -2.2 69.5 72.5 -5.7
 PRO-448   ARG-449  14.6 15.2 -1.5 0.4 105.3 109.1 -53.6
 ARG-449   PHE-450  17.4 18.0 9.8 -6.9 14.6 10.3 54.7
 PHE-450   GLY-451  18.0 18.2 0.0 -8.2 62.4 64.8 -142.2
 GLY-451   GLY-452  14.7 14.9 -6.7 3.5 55.2 56.2 -30.0
 GLY-452   ALA-453  12.5 12.7 -8.6 7.6 88.3 80.4 85.7
 ALA-453   VAL-454  11.9 11.5 -4.1 16.1 128.4 130.0 181.6
 VAL-454   THR-455  9.3 9.2 7.8 1.5 118.0 118.9 -168.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-551   ASP-552  1.3 1.5 -5.3 0.9 60.1 58.1 73.5
 ASP-552   LEU-553  4.2 4.4 6.5 -13.2 136.8 137.4 115.4
 LEU-553   ASP-554  2.6 2.6 4.9 -2.8 66.8 64.8 8.7
 ASP-554   PHE-555  4.7 4.4 4.4 -4.2 88.5 90.7 7.2
 ASP-554   PHE-555  4.7 4.4 4.4 -4.2 88.5 90.7 7.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-554   PHE-555  4.7 4.4 4.4 -4.2 88.5 90.7 7.2
 ASP-554   PHE-555  4.7 4.4 4.4 -4.2 88.5 90.7 7.2
 PHE-555   PRO-556  4.7 4.2 -6.3 -6.3 17.7 15.5 303.3
 PRO-556   VAL-557  6.8 6.3 -1.2 8.7 59.6 61.0 -178.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-562   PHE-563  11.3 11.5 -3.7 1.8 42.0 44.8 104.8
 PHE-563   PHE-564  10.1 10.3 -1.9 3.0 95.1 94.5 -60.6
 PHE-564   VAL-565  12.8 13.1 -5.1 4.0 86.3 83.5 21.5
 VAL-565   LEU-566  15.2 15.5 0.3 -1.2 163.1 164.0 76.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees