Putative Enzyme Ydif
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-275
ASP-276
23.1
23.3
5.7
-21.2
52.6
48.3
-409.5
PRO-284
LEU-285
23.2
23.5
28.3
2.3
135.4
132.3
-672.2
LEU-285
ASN-286
22.3
22.2
-9.4
13.7
151.7
152.4
206.7
LEU-285
ASN-286
22.3
22.2
-9.4
13.7
151.7
152.4
206.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-285
ASN-286
22.3
22.2
-9.4
13.7
151.7
152.4
206.7
LEU-285
ASN-286
22.3
22.2
-9.4
13.7
151.7
152.4
206.7
ASN-286
GLN-287
22.9
23.0
4.1
3.5
50.8
48.6
81.5
GLN-287
ARG-288
21.1
21.3
-8.9
4.9
89.8
85.2
-102.4
ARG-288
LYS-289
19.1
19.1
-5.3
1.4
37.7
42.3
32.9
LYS-289
LEU-290
17.9
17.9
-2.5
2.7
95.9
98.6
-138.9
LEU-290
VAL-291
17.3
17.4
-1.4
1.6
121.5
122.9
48.4
VAL-291
ALA-292
14.8
14.9
0.5
-3.6
120.2
119.4
53.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-297
GLU-298
7.2
7.2
5.7
-6.8
61.5
60.4
-10.5
ARG-300
LYS-301
0.8
1.0
0.4
-1.2
128.7
129.7
162.9
LYS-301
GLY-302
2.7
2.7
1.8
7.9
66.8
63.8
123.0
GLY-302
ALA-303
6.3
6.2
-9.1
15.9
169.1
165.3
185.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-305
ASN-306
7.8
7.7
-3.1
0.0
71.2
71.4
-103.1
ASN-306
VAL-307
10.4
10.2
11.2
-19.3
99.7
102.3
-11.4
VAL-307
GLY-308
11.5
11.5
-11.7
13.1
51.2
51.1
119.8
GLY-308
VAL-309
13.6
13.6
6.3
-3.6
98.9
102.7
-28.5
GLY-308
VAL-309
13.6
13.6
6.3
-3.6
98.9
102.7
-28.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-308
VAL-309
13.6
13.6
6.3
-3.6
98.9
102.7
-28.5
GLY-308
VAL-309
13.6
13.6
6.3
-3.6
98.9
102.7
-28.5
VAL-309
GLY-310
17.1
17.0
3.4
6.1
66.0
68.2
127.6
GLY-310
ILE-311
17.4
17.2
-5.4
7.5
43.6
42.4
-13.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-318
ALA-319
13.3
13.3
6.7
-3.4
55.1
57.4
42.7
ALA-319
ARG-320
10.0
9.9
-4.0
5.9
155.9
160.4
46.9
ARG-320
GLU-321
12.2
12.0
-2.6
2.6
122.3
122.8
-9.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-322
GLY-323
10.5
10.3
4.5
-9.0
127.9
125.7
74.6
GLY-323
CYS-324
8.5
8.5
2.3
3.0
67.2
69.0
96.1
CYS-324
ALA-325
6.1
5.9
7.9
-6.2
56.3
55.8
1.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-371
ASP-372
8.4
8.4
4.6
3.1
85.3
86.7
27.2
ASP-372
VAL-373
5.5
5.5
1.9
-9.4
108.3
110.2
68.1
VAL-373
CYS-374
3.7
3.7
8.1
-6.4
112.3
107.3
-6.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-376
SER-377
10.3
10.2
-0.1
-5.0
104.6
109.4
15.9
SER-377
PHE-378
13.1
13.1
-8.6
7.8
162.4
165.7
-9.1
PHE-378
ALA-379
13.1
13.0
-0.1
6.1
111.6
113.0
181.3
ALA-379
GLU-380
15.8
15.7
-8.8
-1.4
124.5
120.0
-189.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-386
VAL-387
6.1
6.0
-1.4
2.7
63.1
62.8
2.9
VAL-387
GLY-388
8.6
8.6
-1.4
3.4
117.7
119.4
-26.0
GLY-388
VAL-389
11.6
11.6
3.9
-10.0
130.7
130.9
132.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-409
LYS-410
6.1
6.1
0.1
-6.0
83.2
83.8
148.2
LYS-410
LYS-411
4.9
4.7
-1.4
10.2
85.6
88.7
-56.7
LYS-411
ILE-412
1.1
1.0
-1.7
4.4
71.8
69.4
30.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-418
THR-419
18.6
18.7
-4.2
-3.5
139.2
135.7
-295.0
THR-419
ALA-420
21.4
21.6
3.2
-12.8
107.5
106.3
122.0
ALA-420
GLY-421
22.8
23.2
-7.8
-1.0
110.4
112.3
-89.1
GLY-421
SER-422
26.3
26.8
-0.9
31.6
50.2
57.1
-477.2
SER-422
LEU-423
28.5
29.2
-34.0
16.9
70.9
56.1
295.5
LEU-423
LYS-424
26.8
26.9
-5.9
-6.0
17.4
20.6
273.9
LYS-424
THR-425
28.5
28.5
-1.4
-6.9
64.1
61.9
-7.7
THR-425
GLU-426
27.1
26.9
-3.7
-12.7
16.8
12.2
578.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-435
GLN-436
31.5
31.4
-8.8
-6.0
28.1
20.4
400.1
GLN-436
GLU-437
31.1
31.0
13.1
-11.9
116.8
117.8
-51.4
GLU-437
GLY-438
28.4
28.4
-5.1
-5.4
56.1
52.5
209.9
GLY-438
ARG-439
26.4
26.4
-14.3
-9.6
14.5
21.8
644.9
ARG-439
VAL-440
27.3
27.3
14.7
11.8
124.0
126.0
-640.3
VAL-440
LYS-441
23.7
23.9
-0.5
-0.6
108.0
111.1
-64.1
LYS-441
LYS-442
20.9
20.8
3.7
3.6
91.7
88.0
-119.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-447
PRO-448
11.0
11.1
9.7
-14.2
32.0
33.6
-104.2
PRO-448
GLU-449
12.5
12.4
11.6
0.2
96.0
97.5
147.6
GLU-449
ILE-450
11.1
11.1
6.1
-11.9
154.8
152.0
142.9
ILE-450
THR-451
8.5
8.5
4.3
-3.8
127.2
127.5
-111.4
THR-451
PHE-452
9.5
9.4
1.7
2.1
120.8
121.5
-58.5
THR-451
PHE-452
9.5
9.4
1.7
2.1
120.8
121.5
-58.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-451
PHE-452
9.5
9.4
1.7
2.1
120.8
121.5
-58.5
THR-451
PHE-452
9.5
9.4
1.7
2.1
120.8
121.5
-58.5
PHE-452
SER-453
6.0
6.0
0.1
-0.3
57.8
57.1
38.4
SER-453
GLY-454
2.7
2.6
-7.7
3.0
54.9
53.8
94.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-455
ILE-456
2.7
2.9
12.4
-8.2
63.9
68.8
69.2
ILE-456
ALA-457
3.5
3.5
4.9
2.0
11.0
8.9
162.8
ALA-457
LEU-458
2.5
2.5
-8.4
7.5
99.5
100.6
-76.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PHE-524
VAL-525
9.4
9.2
-3.7
4.8
63.9
71.8
108.7
VAL-525
LEU-526
6.3
6.1
2.5
4.8
42.4
33.2
154.1
LEU-526
PRO-527
3.2
3.2
6.6
16.9
88.8
90.6
-20.6
PRO-527
GLU-528
4.4
4.8
-0.5
44.0
98.5
80.4
-282.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees