Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-77   ASP-78  6.5 5.4 2.8 -74.3 137.1 143.4 43.6
 ASP-78   THR-79  5.0 4.2 156.3 -61.1 146.5 143.7 -70.8
 THR-79   ASP-80  6.4 5.6 32.9 -40.8 84.0 132.2 3.7
 ASP-80   SER-81  6.3 2.2 133.3 -61.6 96.8 100.8 0.7
 SER-81   GLU-82  2.7 2.2 -27.2 -137.4 17.1 26.0 122.8
 GLU-82   GLU-83  2.1 2.0 -4.3 4.0 62.0 68.4 3.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees