Superoxide Dismutase [Mn/fe] 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-36   THR-37  6.9 6.9 0.8 2.2 83.9 85.8 6.6
 THR-37   LYS-38  8.1 8.3 5.9 -5.5 99.5 100.9 5.9
 LYS-38   LEU-39  5.5 5.8 0.5 3.9 161.7 161.8 -19.2
 LEU-39   ASN-40  4.2 4.5 0.9 -11.7 125.5 121.1 48.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-70   VAL-71  5.2 4.4 2.2 12.4 53.2 47.4 70.0
 VAL-71   ARG-72  3.3 2.8 4.9 -8.7 96.1 101.8 22.0
 ARG-72   ASN-73  5.1 5.0 -8.5 2.5 41.1 39.6 49.9
 ASN-73   ASN-74  3.8 3.7 -8.9 11.0 92.8 91.5 57.1
 ASN-74   GLY-75  0.8 0.7 -10.9 2.7 147.6 144.6 -64.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees