Alcohol Dehydrogenase (Holo Form) (E.C.1.1.1.1)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-169   CYS-170  4.9 4.8 6.6 -6.4 122.1 121.9 36.1
 CYS-170   LEU-171  5.2 5.2 -4.9 -9.6 52.1 54.5 51.4
 LEU-171   ILE-172  1.8 2.1 28.0 -20.7 157.5 150.4 -45.0
 ILE-172   GLY-173  2.9 2.7 -9.5 10.3 51.8 46.5 -12.8
 GLY-173   CYS-174  4.8 5.0 3.6 0.3 124.2 123.4 -11.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-175   PHE-176  4.0 3.9 3.0 6.6 97.3 96.9 16.9
 PHE-176   SER-177  2.5 2.5 -9.6 11.3 26.6 24.9 -21.8
 SER-177   THR-178  1.7 1.7 -2.8 -2.7 44.5 43.8 42.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-316   ALA-317  7.6 8.2 10.4 0.0 101.2 101.4 -65.0
 ALA-317   ILE-318  4.4 5.0 -10.2 8.2 44.9 41.3 -45.6
 ILE-318   PHE-319  4.2 4.4 5.4 -14.1 121.7 120.7 125.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-359   ASP-360  16.9 16.7 -5.7 5.1 102.4 102.8 -2.8
 ASP-360   LEU-361  18.9 19.1 12.9 -10.7 87.4 80.4 71.6
 LEU-361   LEU-362  16.1 16.3 3.7 2.3 153.3 150.8 -44.0
 LEU-362   ARG-363  15.4 15.6 12.6 -12.9 117.5 112.0 -50.5
 ARG-363   SER-364  19.0 19.3 11.1 57.0 78.2 60.4 294.8
 SER-364   GLY-365  20.6 20.3 -101.4 -47.7 126.3 79.6 -468.7
 GLY-365   GLU-366  18.3 18.2 171.5 24.2 92.8 40.1 758.9
 GLU-366   SER-367  15.8 16.4 -125.1 36.5 124.8 83.5 -240.7
 SER-367   ILE-368  12.5 12.9 71.5 -51.8 142.0 151.2 -297.6
 ILE-368   ARG-369  10.3 10.6 -23.9 30.0 71.5 80.8 -22.8
 ARG-369   THR-370  7.8 7.8 -2.8 0.9 145.1 151.2 32.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees