DNA Gyrase B
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-99
ALA-100
17.4
18.5
55.3
23.8
122.8
130.7
-223.3
ALA-100
GLY-101
17.0
16.8
36.8
10.4
45.3
78.1
123.4
GLY-101
GLY-102
14.7
13.1
10.5
-116.4
112.7
135.1
280.2
GLY-102
LYS-103
12.0
10.6
175.6
54.9
71.7
69.5
-360.0
LYS-103
PHE-104
9.2
8.4
-53.0
34.4
52.4
158.7
-95.7
PHE-104
ASP-105
8.6
10.2
-30.9
99.7
64.7
134.1
-172.4
ASP-105
ASP-106
5.5
7.9
167.8
-5.3
47.8
83.9
314.6
ASP-106
ASN-107
4.9
5.0
-30.4
24.0
76.2
109.1
6.6
ASN-107
SER-108
8.3
7.7
9.5
-81.5
43.4
41.4
-357.2
SER-108
TYR-109
10.6
6.0
-144.4
79.8
150.8
124.0
-173.7
TYR-109
LYS-110
7.9
3.7
20.9
-63.4
104.0
75.4
163.7
LYS-110
VAL-111
5.2
5.5
-154.6
56.5
116.5
136.5
802.6
VAL-111
SER-112
3.2
6.7
-19.0
78.8
115.8
60.1
-139.7
SER-112
GLY-113
5.6
7.9
31.3
119.3
72.9
64.0
-403.2
GLY-113
GLY-114
7.1
11.5
88.5
-25.7
128.6
72.3
-2.6
GLY-114
LEU-115
10.0
13.4
71.4
65.4
152.2
110.2
-465.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-220
GLY-221
8.5
9.1
-23.6
-9.5
49.5
56.5
95.8
GLY-221
ILE-222
6.1
6.1
28.1
6.5
65.8
69.4
78.6
ILE-222
LYS-223
3.3
3.9
-14.3
9.4
142.8
145.3
-21.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees