Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-280   PRO-281  7.9 7.7 2.6 7.1 22.8 26.9 149.0
 PRO-281   ARG-282  7.6 7.3 5.4 -4.4 47.5 47.0 -142.6
 ARG-282   VAL-283  6.6 6.4 6.3 -0.4 49.4 53.2 85.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-313   GLY-314  7.4 7.4 1.2 9.1 27.5 24.9 108.9
 GLY-314   LYS-315  6.1 6.3 -7.6 4.5 121.7 116.8 -7.7
 LYS-315   TYR-316  9.5 9.6 1.4 -2.2 109.5 112.1 -45.8
 TYR-316   MET-317  10.1 10.0 6.4 -7.0 70.9 71.6 -38.1
 MET-317   MET-318  7.4 7.4 9.2 -5.6 14.3 18.5 12.2
 MET-318   GLU-319  7.8 8.3 4.8 13.3 79.5 89.5 95.7
 GLU-319   ASN-320  11.6 12.1 -21.2 17.5 58.8 67.6 -30.8
 ASN-320   GLU-321  12.4 12.4 3.0 -18.1 90.5 76.2 -29.8
 GLU-321   ASN-322  10.4 10.5 3.7 -8.9 23.0 20.2 -48.9
 ASN-322   ALA-323  9.6 9.3 5.0 11.0 89.2 91.1 -1.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-324   LEU-325  3.1 2.8 -11.5 5.6 122.0 127.8 -91.1
 LEU-325   TYR-326  2.0 1.8 -0.4 3.5 145.3 147.3 24.7
 TYR-326   PHE-327  3.0 2.7 0.7 -1.3 46.8 47.8 3.7
 PHE-327   LEU-328  3.7 3.5 -9.4 17.7 146.5 144.8 0.3
 LEU-328   TYR-329  2.0 1.9 10.4 -15.2 53.2 55.5 -65.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-359   VAL-360  6.0 6.2 -8.4 6.8 102.2 103.9 15.4
 VAL-360   GLU-361  7.3 7.5 3.8 2.3 77.1 75.7 -3.5
 GLU-361   ILE-362  7.3 7.5 -1.7 8.4 47.7 44.8 -52.3
 ILE-362   SER-363  8.6 8.6 -2.9 5.0 113.7 116.4 -10.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees