Nad-Specific Glutamate Dehydrogenase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-183
VAL-184
20.2
20.1
11.2
-2.6
76.5
77.2
13.1
VAL-184
GLY-185
19.6
19.3
4.1
-3.7
136.8
136.8
2.1
GLY-185
GLY-186
18.0
18.5
35.1
-72.6
72.9
82.3
-46.5
GLY-186
PHE-187
16.2
16.0
-113.7
-145.1
81.9
101.2
38.6
PHE-187
TYR-188
12.8
12.4
-150.6
111.4
111.6
162.2
-102.4
TYR-188
ASN-189
11.0
12.3
166.7
82.7
106.4
77.4
-13.0
ASN-189
GLY-190
7.2
8.8
-115.4
-146.8
133.3
159.6
339.6
GLY-190
VAL-191
6.2
8.2
-82.8
-6.8
145.9
122.3
-257.6
VAL-191
LEU-192
9.2
10.6
-52.9
120.9
133.0
107.8
152.3
ARG-205
PRO-206
9.2
7.5
-151.0
-50.9
135.8
111.9
415.3
PRO-206
GLU-207
11.2
11.1
-124.7
82.7
89.9
138.5
-155.2
GLU-207
ALA-208
12.9
12.5
-11.3
45.8
125.2
148.2
55.2
ALA-208
THR-209
9.9
9.6
-4.5
-8.5
155.1
154.9
-68.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-374
GLY-375
5.8
5.9
-18.6
13.9
143.5
152.9
-26.4
GLY-375
GLY-376
7.0
7.0
11.7
-3.5
35.0
43.9
28.2
GLY-376
VAL-377
6.1
6.2
16.3
-11.7
88.4
91.4
23.0
VAL-377
LEU-378
3.2
3.1
-3.1
-9.4
92.1
106.3
-9.6
LEU-378
VAL-379
2.3
2.7
17.6
-14.1
15.9
9.8
-18.3
VAL-379
VAL-380
3.3
3.3
29.0
-29.6
64.4
67.4
37.9
VAL-380
GLY-381
1.0
0.9
29.8
-21.9
100.3
98.0
10.5
GLY-381
PHE-382
2.5
2.8
-11.6
8.8
120.5
130.0
-16.0
PHE-382
GLU-383
4.0
4.4
-49.1
72.7
158.4
153.2
66.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-430
ASN-431
4.1
3.7
4.8
-3.3
99.6
99.4
-14.4
ASN-431
ILE-432
4.5
3.5
0.6
-7.5
110.0
105.8
30.8
ILE-432
VAL-433
1.7
0.8
-3.2
4.1
130.4
130.4
-16.8
VAL-433
GLY-434
1.2
2.1
8.1
-1.1
48.4
49.4
49.8
GLY-434
PHE-435
2.8
2.5
-7.2
9.2
65.8
63.1
-13.5
PHE-435
GLN-436
5.6
5.2
-1.3
-7.8
76.1
76.9
-3.0
GLN-436
LYS-437
5.8
6.1
3.0
-0.9
41.1
46.6
8.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees