Udp-Galactose 4-Epimerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-223   ASN-224  5.2 5.0 5.2 3.4 86.5 90.4 61.4
 ASN-224   VAL-225  4.3 4.0 9.7 -13.7 159.1 153.6 8.9
 VAL-225   PHE-226  2.7 2.5 -1.5 -1.7 80.3 84.3 17.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-238   ARG-239  9.2 9.3 -12.8 21.4 99.6 100.9 9.3
 ARG-239   ASP-240  6.0 6.6 6.6 -10.4 104.3 100.1 -0.2
 ASP-240   TYR-241  2.2 3.1 20.5 -45.9 140.6 139.8 161.6
 TYR-241   ILE-242  2.0 2.3 11.1 -3.3 94.0 93.4 -21.5
 ILE-242   HIS-243  3.4 3.5 1.7 -2.5 145.1 151.8 28.1
 VAL-238   ARG-239  1.5 1.4 -12.8 21.4 122.6 117.5 21.1
 ARG-239   ASP-240  2.8 3.0 6.6 -10.4 55.9 50.5 14.1
 ASP-240   TYR-241  4.5 5.0 20.5 -45.9 110.0 105.4 127.7
 TYR-241   ILE-242  7.7 8.2 11.1 -3.3 44.7 44.2 19.2
 VAL-238   ARG-239  9.2 9.3 -12.8 21.4 99.6 100.9 9.3
 ARG-239   ASP-240  6.0 6.6 6.6 -10.4 104.3 100.1 -0.2
 ASP-240   TYR-241  2.2 3.1 20.5 -45.9 140.6 139.8 161.6
 TYR-241   ILE-242  2.0 2.3 11.1 -3.3 94.0 93.4 -21.5
 ILE-242   HIS-243  3.4 3.5 1.7 -2.5 145.1 151.8 28.1
 GLY-237   VAL-238  3.3 3.4 6.6 4.9 51.2 54.8 130.1
 VAL-238   ARG-239  1.5 1.4 -12.8 21.4 122.6 117.5 21.1
 ARG-239   ASP-240  2.8 3.0 6.6 -10.4 55.9 50.5 14.1
 ASP-240   TYR-241  4.5 5.0 20.5 -45.9 110.0 105.4 127.7
 TYR-241   ILE-242  7.7 8.2 11.1 -3.3 44.7 44.2 19.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-294   LYS-295  3.0 3.0 22.5 -18.7 67.1 65.3 55.8
 LYS-295   VAL-296  0.6 0.7 0.0 3.0 135.0 132.0 -55.8
 VAL-296   VAL-297  3.6 3.9 -11.5 14.4 111.9 115.3 101.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-308   ALA-309  2.4 2.9 3.7 -16.3 47.9 45.9 -61.7
 ALA-309   ASN-310  1.1 0.7 -1.3 6.3 110.1 94.1 107.1
 ASN-310   PRO-311  3.7 3.6 17.5 -13.2 106.0 100.3 30.0
 PRO-311   SER-312  6.6 6.6 4.2 3.2 65.3 70.3 35.1
 TYR-308   ALA-309  2.5 2.7 3.7 -16.3 13.7 9.8 -207.7
 ALA-309   ASN-310  3.8 3.6 -1.3 6.3 136.1 126.7 158.6
 ASN-310   PRO-311  2.6 2.1 17.5 -13.2 68.2 60.0 44.0
 TYR-308   ALA-309  2.4 2.9 3.7 -16.3 47.9 45.9 -61.7
 ALA-309   ASN-310  1.1 0.7 -1.3 6.3 110.1 94.1 107.1
 ASN-310   PRO-311  3.7 3.6 17.5 -13.2 106.0 100.3 30.0
 PRO-311   SER-312  6.6 6.6 4.2 3.2 65.3 70.3 35.1
 CYS-307   TYR-308  4.4 4.7 -30.7 6.6 105.8 112.8 -59.1
 TYR-308   ALA-309  2.5 2.7 3.7 -16.3 13.7 9.8 -207.7
 ALA-309   ASN-310  3.8 3.6 -1.3 6.3 136.1 126.7 158.6
 ASN-310   PRO-311  2.6 2.1 17.5 -13.2 68.2 60.0 44.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees