Glutamate Receptor, Ionotropic Kainate 2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-106
PHE-107
5.8
5.8
-2.1
14.3
150.2
146.2
90.0
PHE-107
MET-108
6.5
6.8
-6.4
9.5
125.1
124.6
20.0
MET-108
THR-109
4.9
4.9
-3.8
-2.9
50.0
47.7
44.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-214
LYS-215
9.6
9.5
-0.4
-1.7
118.4
109.5
87.1
LYS-215
GLY-216
6.0
5.7
5.5
-20.6
133.3
138.0
106.6
GLY-216
TYR-217
3.2
3.2
8.0
-1.1
100.7
97.2
-81.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-237
LEU-238
17.4
17.1
-7.6
-2.3
157.7
156.3
-158.2
LEU-238
GLN-239
15.1
14.8
2.4
6.0
87.2
84.7
83.4
GLN-239
GLU-240
13.9
13.5
-12.8
-5.8
92.4
102.3
-60.0
GLU-240
GLU-241
17.6
17.2
2.0
16.2
19.6
25.3
195.5
GLU-241
ASP-242
18.1
18.0
-13.6
12.7
129.3
137.5
7.9
ASP-242
LYS-243
15.0
15.3
-13.6
-0.7
122.9
117.7
-101.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
MET-247
LYS-248
8.1
8.0
-1.9
-0.5
87.8
88.0
20.7
LYS-248
GLU-249
5.5
5.5
1.2
1.0
154.7
153.7
-36.9
GLU-249
LYS-250
7.0
7.0
-5.7
1.6
47.4
45.8
54.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees