Clpb Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-449   ARG-450  2.7 2.5 2.2 2.9 50.7 47.3 23.2
 ARG-450   ALA-451  3.9 3.4 12.7 1.6 24.8 24.9 37.0
 ALA-451   GLU-452  5.3 4.5 -3.5 -1.2 113.3 115.1 -4.2
 GLU-452   TRP-453  4.1 3.0 14.9 -19.2 112.9 110.6 10.5
 GLU-452   TRP-453  4.1 3.0 14.9 -19.2 112.9 110.6 10.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-452   TRP-453  4.1 3.0 14.9 -19.2 112.9 110.6 10.5
 GLU-452   TRP-453  4.1 3.0 14.9 -19.2 112.9 110.6 10.5
 TRP-453   GLU-454  0.3 0.7 -14.3 -1.9 19.4 26.2 41.7
 GLU-454   ARG-455  2.1 2.6 -4.8 3.3 45.8 46.2 8.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-456   ARG-457  3.4 2.7 7.3 -1.6 55.0 55.8 9.2
 ARG-457   GLU-458  2.8 3.2 12.3 10.0 18.5 23.4 63.6
 GLU-458   ILE-459  0.6 1.2 -9.5 4.8 121.5 126.9 -10.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees