Glutamate Receptor Subunit 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  ASN-214   LEU-215  6.0 5.9 8.4 3.1 53.5 52.1 82.2  LEU-215   ASP-216  2.8 2.6 1.7 -2.9 38.3 32.8 -9.3  ASP-216   SER-217  5.5 5.1 -1.5 -7.3 90.6 89.4 18.3  ASN-214   LEU-215  4.5 4.6 8.4 3.1 124.6 125.3 -28.7  LEU-215   ASP-216  6.4 6.6 1.7 -2.9 150.2 155.7 3.3  ASP-216   SER-217  4.2 4.5 -1.5 -7.3 86.0 86.5 -5.3  SER-217   LYS-218  1.1 1.2 -1.5 -19.6 76.1 62.8 80.1  ASN-214   LEU-215  6.0 5.9 8.4 3.1 53.5 52.1 82.2  LEU-215   ASP-216  2.8 2.6 1.7 -2.9 38.3 32.8 -9.3  ASP-216   SER-217  5.5 5.1 -1.5 -7.3 90.6 89.4 18.3  ASN-214   LEU-215  4.5 4.6 8.4 3.1 124.6 125.3 -28.7  LEU-215   ASP-216  6.4 6.6 1.7 -2.9 150.2 155.7 3.3  ASP-216   SER-217  4.2 4.5 -1.5 -7.3 86.0 86.5 -5.3  SER-217   LYS-218  1.1 1.2 -1.5 -19.6 76.1 62.8 80.1  LYS-218   GLY-219  4.4 4.0 12.8 4.6 84.5 70.5 5.9  GLY-219   TYR-220  7.1 7.0 16.2 -6.9 71.0 72.4 -3.6  TYR-220   GLY-221  10.5 10.4 -4.7 6.1 45.5 48.4 -13.8 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees