Hypothetical Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-5   ILE-6  7.2 6.8 2.4 -3.1 118.7 119.4 15.7
 ILE-6   ILE-7  7.0 6.6 2.3 -7.2 119.0 116.5 20.3
 ILE-7   LYS-8  3.7 3.5 5.3 -17.0 140.4 134.8 43.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-18   ARG-19  8.4 9.0 18.3 -35.2 150.1 147.7 68.4
 ARG-19   ASP-20  10.4 10.6 -21.3 9.7 76.7 73.3 27.3
 ASP-20   LEU-21  9.5 9.9 -14.1 5.7 79.3 82.4 35.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-36   ILE-37  11.6 11.7 -0.1 6.2 76.6 69.2 41.9
 ILE-37   GLY-38  12.9 13.1 2.5 9.9 156.9 155.5 -54.9
 GLY-38   PRO-39  13.5 13.4 -0.8 1.2 57.8 80.9 -65.0
 PRO-39   SER-40  12.7 13.3 -150.1 170.2 86.8 89.8 54.8
 SER-40   LYS-41  9.1 9.5 -6.0 2.2 51.2 59.3 3.2
 SER-40   LYS-41  9.1 9.5 -6.0 2.2 51.2 59.3 3.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-40   LYS-41  9.1 9.5 -6.0 2.2 51.2 59.3 3.2
 SER-40   LYS-41  9.1 9.5 -6.0 2.2 51.2 59.3 3.2
 LYS-41   VAL-42  8.5 8.4 3.7 -10.1 165.0 168.2 23.5
 VAL-42   TYR-43  7.7 7.8 -1.6 3.6 63.2 67.7 -12.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-53   CYS-54  8.1 8.2 1.7 -10.7 103.5 107.8 8.9
 CYS-54   LEU-55  6.4 6.8 -8.0 -2.2 8.6 4.1 36.7
 LEU-55   GLN-56  5.6 5.9 0.5 10.7 117.9 118.3 -21.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-65   ASN-66  1.8 2.0 -0.8 -4.0 79.0 81.7 31.2
 ASN-66   ILE-67  2.0 1.6 -9.0 10.0 35.4 31.7 13.4
 ILE-67   GLU-68  4.1 3.7 -17.3 20.7 99.3 101.8 -9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees