Gelatinase A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-97   THR-98  7.9 4.2 10.2 15.0 141.7 103.8 -12.8
 THR-98   TYR-99  7.3 1.0 -23.7 36.4 59.8 60.4 -8.1
 TYR-99   ARG-100  5.0 3.8 -19.7 24.4 48.7 59.3 -5.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 THR-112   VAL-113  4.7 10.8 -7.9 -11.8 32.2 152.5 9.0
 VAL-113   ASP-114  2.3 11.7 38.9 108.0 140.3 42.6 27.6
 ASP-114   ASP-115  5.3 9.1 77.9 -73.2 91.7 40.1 3.4
 ASP-115   ALA-116  7.3 7.9 -162.3 -0.1 72.7 68.9 38.6
 ALA-116   PHE-117  6.2 6.5 170.8 8.7 171.4 107.6 -91.5
 PHE-117   ALA-118  5.1 9.4 -167.1 -4.8 59.5 132.4 17.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLU-139   ALA-140  9.2 8.1 8.3 -10.6 82.2 39.8 -0.3
 ALA-140   ASP-141  6.3 5.7 -48.5 -24.6 119.3 120.3 -41.0
 ASP-141   ILE-142  3.4 6.8 170.0 173.6 123.7 51.9 0.4
 ILE-142   MET-143  1.1 5.6 113.5 -19.0 138.6 74.7 -67.0
 MET-143   ILE-144  3.5 2.6 -44.0 -14.0 44.3 118.5 -7.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees