Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-104
PHE-105
10.8
10.5
3.1
0.4
148.1
151.6
-23.5
PHE-105
MET-106
11.6
11.2
4.1
-20.1
115.9
116.0
13.6
MET-106
THR-107
8.2
7.8
5.1
13.6
35.9
45.4
38.6
THR-107
LEU-108
7.0
5.7
26.5
-20.6
107.6
112.8
-24.6
LEU-108
GLY-109
4.2
2.7
-17.7
24.9
140.5
140.8
7.9
GLY-109
ILE-110
3.2
3.0
-53.1
28.5
64.0
68.1
36.9
ILE-110
SER-111
5.6
5.3
0.2
-7.7
117.0
110.4
14.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
12.1
11.4
5.6
8.6
101.8
116.5
-24.5
LEU-210
ILE-211
8.5
8.2
2.3
21.7
158.7
162.9
-66.6
ILE-211
ASP-212
7.8
8.1
175.7
148.9
106.4
130.1
20.6
ASP-212
SER-213
4.7
5.0
136.9
-104.9
68.3
54.7
69.6
SER-213
LYS-214
4.8
3.9
-5.2
1.6
82.0
71.0
23.0
LYS-214
GLY-215
3.6
3.1
18.0
0.2
36.1
38.0
30.8
GLY-215
TYR-216
5.9
5.4
9.4
-5.9
76.3
77.0
9.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees