Adenosylhomocysteinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-169   LYS-170  3.4 2.6 -49.0 -4.5 142.3 156.3 -351.7
 LYS-170   TYR-171  6.0 3.7 -38.3 18.5 101.8 100.1 -55.1
 TYR-171   LEU-172  7.8 7.2 -13.5 18.2 133.5 105.3 10.2
 LEU-172   PHE-173  6.1 7.0 -19.6 -15.5 154.8 158.8 -251.0
 PHE-173   ASP-174  5.2 5.2 14.0 6.4 64.9 40.7 109.9
 ASP-174   ASN-175  9.0 5.1 -80.8 1.2 87.7 97.7 77.3
 ASN-175   ARG-176  10.3 8.8 155.5 -27.2 30.0 85.2 490.4
 ARG-176   TYR-177  13.1 10.3 -54.1 28.4 128.2 136.6 -167.2
 TYR-177   GLY-178  11.1 9.7 -28.7 24.5 104.5 150.9 -52.1
 GLY-178   THR-179  7.7 7.1 27.6 10.6 43.4 50.9 172.0
 THR-179   GLY-180  8.9 9.1 13.2 -15.6 64.1 79.5 34.9
 GLY-180   GLN-181  12.3 12.0 8.3 -2.9 29.9 38.0 54.6
 GLN-181   SER-182  11.9 11.2 -20.7 13.0 138.6 146.1 -82.8
 SER-182   THR-183  8.9 8.7 4.1 -4.5 61.1 62.9 -8.0
 THR-183   TRP-184  11.5 11.7 4.1 -5.4 51.2 54.8 -21.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-335   GLY-336  3.4 3.1 12.3 -5.2 26.4 26.5 26.1
 GLY-336   HIS-337  4.2 3.9 -60.6 69.1 142.0 127.8 96.1
 HIS-337   PRO-338  3.7 3.7 10.2 -3.9 98.0 103.6 22.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees