Hla Class I Histocompatibility Antigen

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-185   LYS-186  9.1 9.5 3.9 -9.3 57.0 52.3 -30.0
 LYS-186   THR-187  12.5 12.6 17.0 -13.7 63.6 69.1 66.7
 THR-187   HIS-188  11.7 11.9 7.2 -5.2 57.3 57.5 -37.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-204   ALA-205  11.8 11.9 -4.9 2.9 95.0 96.7 -21.2
 ALA-205   LEU-206  9.2 9.5 5.1 -0.5 22.7 24.6 63.2
 LEU-206   SER-207  11.1 11.4 -0.4 7.9 111.3 108.8 -15.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-211   GLU-212  2.3 2.3 10.0 -10.2 34.1 38.8 16.4
 GLU-212   ILE-213  1.0 1.0 1.8 3.2 32.6 29.5 41.8
 ILE-213   THR-214  0.9 0.8 0.8 -7.6 56.8 57.1 -64.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-230   VAL-231  11.9 12.2 15.8 -10.9 4.2 11.6 34.2
 VAL-231   GLU-232  12.1 12.4 6.8 -7.8 65.9 61.7 -11.8
 GLU-232   THR-233  9.7 10.2 -6.8 1.4 97.0 95.3 28.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-241   GLN-242  7.4 7.9 1.4 -1.4 35.5 31.5 20.6
 GLN-242   LYS-243  9.1 9.5 -10.0 5.9 111.0 108.4 -4.3
 LYS-243   TRP-244  8.9 9.1 6.5 0.2 31.4 29.2 65.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-261   GLN-262  3.9 3.6 -4.5 5.2 93.6 97.3 13.8
 GLN-262   HIS-263  2.1 2.2 3.7 -2.2 16.0 15.3 18.1
 HIS-263   GLU-264  4.3 4.3 -3.1 2.5 88.2 91.8 55.0
 GLU-264   GLY-265  7.4 7.4 4.3 -14.1 102.2 100.1 30.6
 GLY-265   LEU-266  9.4 9.6 8.5 7.0 166.0 162.4 -200.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees