Allantoate Amidohydrolase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-211   ILE-212  7.9 8.2 -2.8 -4.7 58.0 59.7 31.7
 ILE-212   VAL-213  5.6 5.9 7.3 -16.7 162.3 161.1 139.3
 VAL-213   GLY-214  5.5 5.8 9.7 11.8 122.9 123.7 -129.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-326   GLU-327  9.9 10.0 12.2 -18.4 159.3 153.4 103.1
 GLU-327   GLU-328  9.9 10.3 10.8 4.2 113.3 114.3 -114.7
 GLU-328   PRO-329  11.3 11.5 3.4 -16.4 149.5 142.9 187.9
 PRO-329   VAL-330  9.8 9.9 24.3 -26.3 144.9 143.1 68.3
 VAL-330   PRO-331  10.2 10.8 25.4 -14.8 137.9 135.0 -145.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees