Catabolite Gene Activator

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-127   ALA-128  5.8 5.9 -15.9 -6.2 53.6 46.5 71.7
 ALA-128   GLU-129  5.0 4.6 10.4 -3.3 70.3 68.2 34.0
 GLU-129   LYS-130  5.8 5.7 17.8 -19.4 54.7 48.5 5.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees