D-Glyceraldehyde-3-Phosphate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-155   PRO-156  6.6 6.7 0.2 -1.0 93.3 95.6 -65.7
 PRO-156   LEU-157  6.4 6.5 -4.4 8.2 59.3 58.9 -38.6
 LEU-157   ALA-158  3.3 3.3 -2.8 -0.8 14.1 14.6 144.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-212   ALA-213  13.1 13.2 13.5 -10.9 107.4 107.1 50.0
 ALA-213   VAL-214  13.7 13.8 2.3 1.2 80.2 76.7 86.9
 VAL-214   GLY-215  10.4 10.7 -3.0 12.8 146.8 143.9 263.8
 GLY-215   LYS-216  11.9 12.6 -2.9 -7.2 84.1 80.3 39.6
 LYS-216   VAL-217  15.1 15.5 7.4 -1.3 111.0 109.5 -183.3
 VAL-217   LEU-218  14.0 13.9 -8.8 1.0 127.0 134.0 -196.4
 LEU-218   PRO-219  11.8 11.9 5.0 -7.0 32.3 37.5 -36.2
 PRO-219   GLU-220  13.6 13.7 3.5 -7.9 42.8 42.1 -121.9
 GLU-220   LEU-221  10.8 11.0 22.8 -22.1 93.8 97.7 180.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-262   ALA-263  11.9 12.0 -0.2 1.9 5.2 5.1 -66.4
 ALA-263   GLU-264  11.3 11.5 5.9 -7.9 115.9 115.1 -7.3
 GLU-264   GLY-265  15.0 15.2 -15.1 30.7 106.0 111.3 246.9
 GLY-265   GLU-266  16.2 16.3 -12.1 -5.0 93.9 85.3 12.2
 GLU-266   MET-267  14.9 15.4 9.7 -4.4 56.4 52.1 21.7
 GLU-266   MET-267  14.9 15.4 9.7 -4.4 56.4 52.1 21.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-266   MET-267  14.9 15.4 9.7 -4.4 56.4 52.1 21.7
 GLU-266   MET-267  14.9 15.4 9.7 -4.4 56.4 52.1 21.7
 MET-267   LYS-268  11.8 12.3 13.5 -4.9 17.9 23.3 379.3
 LYS-268   GLY-269  13.0 13.5 6.4 -9.6 45.2 46.5 -118.3
 GLY-269   VAL-270  11.5 11.7 2.1 5.8 101.9 104.0 -143.3
 VAL-270   LEU-271  9.1 9.3 -11.8 10.4 72.7 75.6 18.1
 LEU-271   GLY-272  7.2 7.4 -5.3 5.5 111.7 112.7 -77.2
 GLY-272   TYR-273  7.8 8.0 3.5 -4.7 120.5 123.5 19.3
 GLY-272   TYR-273  7.8 8.0 3.5 -4.7 120.5 123.5 19.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-272   TYR-273  7.8 8.0 3.5 -4.7 120.5 123.5 19.3
 GLY-272   TYR-273  7.8 8.0 3.5 -4.7 120.5 123.5 19.3
 TYR-273   THR-274  9.4 9.4 7.1 -5.0 53.1 50.8 78.9
 THR-274   GLU-275  10.9 10.9 -0.6 -4.4 60.7 61.4 81.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-283   ASN-284  3.5 3.4 0.8 -3.7 126.7 127.9 79.1
 ASN-284   GLY-285  1.7 1.6 1.1 2.8 110.2 110.9 -30.9
 GLY-285   GLU-286  2.2 2.5 -8.0 8.8 136.6 138.9 59.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-289   SER-290  5.2 5.1 -6.1 3.5 50.5 50.8 106.2
 SER-290   VAL-291  2.8 2.8 3.2 -0.7 87.7 85.2 11.4
 VAL-291   PHE-292  4.1 4.2 -4.2 0.5 52.3 52.0 34.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-312   ASN-313  2.6 2.5 5.3 -1.2 80.4 78.3 28.4
 ASN-313   GLU-314  6.3 6.3 -7.1 4.9 45.8 50.9 49.4
 GLU-314   THR-315  7.1 7.3 1.9 3.6 95.7 93.0 -50.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees