Glutamate Receptor Ionotropic, Nmda 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-143
GLN-144
7.3
7.7
-19.4
3.7
55.6
52.0
48.2
GLN-144
GLY-145
3.7
4.2
13.0
5.5
52.4
56.3
51.9
GLY-145
LEU-146
0.9
0.7
4.8
-14.1
121.7
118.5
14.3
LEU-146
THR-147
3.5
3.0
-3.5
-2.7
53.6
56.1
-3.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-238
VAL-239
7.1
6.9
-6.9
3.9
66.3
62.3
-29.8
VAL-239
THR-240
6.8
6.8
4.8
-19.6
169.9
167.7
45.9
THR-240
THR-241
6.5
6.6
5.0
81.0
104.5
109.6
-86.5
THR-241
GLY-242
9.6
9.3
-171.3
6.5
7.0
80.5
531.4
GLY-242
GLU-243
10.9
7.9
151.3
-21.8
121.4
159.9
-454.5
GLU-243
LEU-244
10.0
8.2
5.8
-33.6
107.8
119.6
30.4
LEU-244
PHE-245
6.4
5.3
-42.7
63.3
19.7
30.4
-97.5
PHE-245
PHE-246
5.9
6.9
-167.9
146.7
70.9
37.0
71.0
PHE-246
ARG-247
3.3
3.7
84.3
-41.7
67.4
70.5
65.3
ARG-247
SER-248
2.5
2.2
-10.4
3.8
59.8
66.8
16.8
SER-248
GLY-249
3.4
3.1
-31.4
22.0
123.5
121.2
-24.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees