Calmodulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-99   ILE-100  4.5 4.1 18.2 -33.3 140.2 132.3 29.9
 ILE-100   SER-101  4.9 5.2 48.8 8.8 63.3 55.3 84.4
 SER-101   ALA-102  8.5 8.1 -7.7 -3.7 58.6 82.0 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-127   ALA-128  12.0 9.6 12.6 -12.8 87.9 82.3 -4.9
 ALA-128   ASP-129  8.4 6.1 -17.6 16.4 39.9 60.5 3.8
 ASP-129   ILE-130  6.8 7.2 -117.0 -0.7 27.7 5.8 346.9
 ILE-130   ASP-131  6.5 7.2 0.3 8.5 141.6 102.1 -17.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-135   VAL-136  6.3 6.2 -10.4 17.2 87.2 79.7 11.6
 VAL-136   ASN-137  3.4 3.8 -1.1 4.3 79.9 90.4 -4.5
 ASN-137   TYR-138  0.5 0.4 -117.0 7.9 59.0 49.7 183.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees