Glycogen [Starch] Synthase Isoform 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-198   ARG-199  4.8 4.8 4.0 8.0 89.1 90.8 10.4
 ARG-199   TYR-200  4.8 5.1 -12.6 2.2 154.2 153.5 -62.2
 TYR-200   LEU-201  5.3 5.3 23.7 -22.0 69.3 67.0 40.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-206   PHE-207  6.4 5.5 -26.3 -40.7 100.6 109.0 -166.4
 PHE-207   ASP-208  4.7 5.8 53.6 -8.2 33.0 19.4 464.0
 ASP-208   PHE-209  7.3 7.5 4.0 1.0 68.9 75.5 -32.1
 PHE-209   TYR-210  5.2 5.0 10.1 2.8 56.1 52.1 59.3
 TYR-210   ASN-211  7.7 7.5 -31.2 26.1 73.3 74.6 -7.7
 ASN-211   CYS-212  10.9 10.9 -14.7 28.8 32.8 35.7 -167.4
 CYS-212   LEU-213  10.2 10.0 31.8 -32.7 94.0 87.7 133.8
 CYS-212   LEU-213  10.2 10.0 31.8 -32.7 94.0 87.7 133.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-212   LEU-213  10.2 10.0 31.8 -32.7 94.0 87.7 133.8
 CYS-212   LEU-213  10.2 10.0 31.8 -32.7 94.0 87.7 133.8
 LEU-213   GLU-214  8.7 9.5 -26.7 12.1 82.3 70.3 63.2
 GLU-214   SER-215  12.4 13.1 -15.2 22.4 11.4 7.0 -115.9
 SER-215   VAL-216  11.7 12.1 -1.4 -15.7 66.9 64.1 60.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-276   GLN-277  9.8 9.8 -2.9 -6.7 26.5 28.8 70.1
 GLN-277   ALA-278  9.3 9.2 11.3 -10.2 102.4 99.7 -48.5
 ALA-278   PHE-279  10.0 9.5 5.1 4.3 30.9 28.8 93.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-590   GLU-591  8.3 8.3 -26.0 26.8 113.2 120.9 35.8
 GLU-591   ALA-592  6.7 6.8 -13.5 10.8 119.0 111.0 -10.2
 ALA-592   LEU-593  5.1 5.2 0.6 -6.2 129.9 127.5 69.6
 LEU-593   SER-594  4.1 3.7 10.8 31.5 97.6 91.2 -136.4
 SER-594   ASP-595  1.7 2.0 -37.3 8.7 108.3 86.5 54.5
 ASP-595   LEU-596  1.6 1.9 -8.9 3.4 47.4 37.7 17.8
 LEU-596   LEU-597  3.6 3.4 4.2 -10.3 141.1 141.6 49.7
 LEU-597   ASP-598  2.8 2.8 -5.4 2.2 107.5 106.2 -21.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees