Sucrose Isomerase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-53   HIS-54  4.8 5.2 -3.5 -0.1 152.8 152.2 -20.5
 HIS-54   TYR-55  2.4 3.1 0.7 6.2 51.6 50.9 13.5
 TYR-55   ALA-56  4.2 4.4 3.3 2.0 38.8 41.6 75.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-72   MET-73  2.3 1.9 -9.8 0.8 63.7 59.8 113.1
 MET-73   LYS-74  3.4 3.7 14.9 0.5 145.7 145.1 -94.0
 LYS-74   GLU-75  3.3 3.8 -7.7 6.2 89.3 95.0 -10.3
 GLU-75   TYR-76  6.2 6.7 -13.6 10.8 117.4 118.8 15.9
 TYR-76   GLY-77  5.2 5.5 -7.8 9.1 63.0 63.9 22.9
 GLY-77   THR-78  4.0 4.1 -2.6 -0.1 84.1 81.2 -13.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-96   MET-97  6.8 6.6 2.2 -6.2 118.4 114.6 -18.6
 MET-97   VAL-98  3.4 3.1 -11.1 13.4 135.4 136.1 30.6
 VAL-98   ASP-99  0.4 0.2 2.4 -13.2 117.3 114.1 101.2
 ASP-99   VAL-100  3.4 3.5 -9.8 7.9 107.2 106.2 -54.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-192   GLY-193  11.4 11.1 -0.3 -3.7 125.7 127.3 -27.3
 GLY-193   VAL-194  11.3 11.1 5.5 4.5 59.6 61.1 29.2
 VAL-194   SER-195  7.8 7.5 -2.5 37.6 164.4 171.9 375.4
 SER-195   GLY-196  8.0 7.5 -29.6 -16.7 128.1 126.9 -325.1
 GLY-196   MET-197  4.4 4.1 17.1 0.7 118.3 123.9 -78.7
 MET-197   ARG-198  3.2 2.8 2.7 3.3 52.9 53.6 56.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-275   MET-276  4.2 4.0 -0.9 -0.7 108.7 109.9 32.0
 MET-276   ALA-277  1.4 1.8 2.4 -17.8 111.2 114.4 70.6
 ALA-277   PHE-278  4.6 5.1 7.4 1.0 117.9 103.6 -90.3
 PHE-278   THR-279  7.0 7.6 -5.3 13.9 108.6 111.7 89.0
 THR-279   PHE-280  10.4 10.7 -2.4 -1.9 73.7 70.0 -18.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-308   VAL-309  12.1 12.6 -9.6 6.7 129.3 131.1 -9.9
 VAL-309   ASP-310  9.9 10.5 -0.9 -4.2 72.8 71.5 0.5
 ASP-310   ALA-311  7.7 8.2 -1.8 8.6 42.4 46.4 -12.4
 ALA-311   ILE-312  7.3 7.7 0.7 8.6 73.2 69.3 14.9
 ILE-312   ALA-313  7.6 7.7 0.2 4.0 66.5 71.8 37.5
 ALA-313   GLY-314  4.1 4.1 19.4 -13.2 139.3 135.7 -116.5
 GLY-314   GLU-315  2.6 3.0 -13.2 -11.7 91.6 95.8 3.8
 GLU-315   TYR-316  1.4 1.8 14.8 4.4 38.2 37.0 89.5
 TYR-316   GLY-317  3.8 4.1 6.9 -6.5 21.7 27.6 10.4
 GLY-317   TRP-318  2.3 2.6 -1.1 -6.1 109.3 108.1 -26.9
 TRP-318   ASN-319  0.7 1.0 2.9 -3.8 51.0 50.9 -5.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees