Chlorella Virus DNA Ligase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-184   LEU-185  3.3 3.3 -2.2 8.1 20.8 31.2 1.6
 LEU-185   LYS-186  3.4 3.6 6.5 2.4 125.3 124.9 -1.5
 LYS-186   MET-187  2.5 2.3 13.0 -13.3 146.5 134.9 -0.2
 MET-187   LYS-188  0.7 1.3 7.5 -8.2 135.9 142.0 7.6
 LYS-188   GLN-189  1.5 0.4 -73.6 6.5 31.4 44.4 31.0
 GLN-189   PHE-190  0.4 3.5 -95.6 -23.5 42.5 42.2 59.1

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees