Benzoylformate Decarboxylase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-454   ASN-455  4.2 4.2 -2.9 4.5 105.6 105.4 15.6
 ASN-455   GLY-456  7.4 7.3 -1.8 12.3 142.0 142.4 213.0
 GLY-456   THR-457  6.5 6.5 -7.9 0.5 161.6 160.7 -171.5
 THR-457   TYR-458  6.4 6.2 1.6 1.1 81.7 84.0 6.4
 TYR-458   GLY-459  5.6 5.7 2.6 -10.0 88.8 88.8 -9.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-476   ASP-477  6.0 5.7 -0.4 3.6 159.4 156.1 61.7
 ASP-477   VAL-478  6.5 6.4 -3.6 1.0 103.8 105.5 5.9
 VAL-478   PRO-479  4.9 4.7 -7.5 14.5 144.4 142.6 112.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees