Bacteriophytochrome
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-324
ALA-325
1.8
1.9
18.5
-13.9
119.3
117.3
39.6
ALA-325
ALA-326
1.6
0.8
-4.8
-3.9
87.1
84.8
12.2
ALA-326
PHE-327
3.1
3.5
28.1
-13.1
35.2
29.0
34.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-443
GLU-444
12.1
12.0
7.4
1.5
89.5
89.5
3.2
GLU-444
LEU-445
12.5
12.4
-3.0
67.9
131.0
142.7
176.7
LEU-445
ARG-446
14.4
13.5
-28.7
-53.8
77.5
80.8
50.8
ARG-446
LEU-447
17.3
17.2
31.1
-23.1
46.3
24.8
26.7
LEU-447
GLU-448
16.2
19.4
48.5
-10.7
102.6
97.9
-6.6
GLU-448
VAL-449
18.8
23.1
39.3
34.4
50.6
64.8
92.0
VAL-449
ALA-450
18.3
25.5
33.5
2.6
85.2
5.9
102.3
ALA-450
TRP-451
21.5
25.8
-132.9
-10.5
90.4
108.7
-54.1
TRP-451
GLY-452
22.5
29.6
162.0
169.9
70.7
113.9
-2.5
GLY-452
GLY-453
25.6
30.4
-30.9
-2.5
45.2
73.8
16.9
LYS-460
ASP-461
26.4
34.6
131.4
17.5
136.1
117.1
-550.9
ASP-461
ASP-462
28.4
33.0
25.0
13.7
83.4
70.6
9.7
ASP-462
LEU-463
31.8
34.5
25.7
15.3
85.7
43.2
71.9
LEU-463
GLY-464
33.8
32.9
159.3
-73.7
21.5
30.9
301.1
GLY-464
PRO-465
34.9
32.0
-2.3
6.5
123.8
106.8
11.6
PRO-465
ARG-466
33.2
29.3
163.0
13.9
97.0
130.0
-388.6
ARG-466
HIS-467
32.5
29.1
146.3
55.6
48.8
140.7
502.1
HIS-467
SER-468
34.8
28.4
-29.0
33.5
112.3
105.4
-15.8
SER-468
PHE-469
32.4
25.8
-168.7
69.3
131.9
90.8
-250.8
PHE-469
ASP-470
30.4
23.9
-50.6
14.9
111.4
22.2
50.4
ASP-470
THR-471
30.4
24.2
143.3
-8.8
106.9
114.6
188.9
THR-471
TYR-472
27.4
22.7
-145.1
48.2
14.8
118.0
-380.5
TYR-472
LEU-473
25.6
20.0
-152.1
18.1
91.2
67.0
33.9
LEU-473
GLU-474
23.3
19.0
-129.0
8.3
31.6
20.0
364.0
GLU-474
GLU-475
20.5
18.9
-152.6
14.4
89.9
90.9
-204.8
GLU-475
LYS-476
19.2
16.9
-120.8
-9.9
58.8
109.4
-249.1
LYS-476
ARG-477
15.5
14.2
-119.2
56.0
76.0
54.3
71.7
ARG-477
GLY-478
13.9
14.0
-22.7
-5.9
73.1
74.4
26.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees