Transportin-1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ASP-138   SER-139  22.1 20.6 -86.1 -13.9 159.0 93.8 -219.4
 SER-139   GLU-140  21.0 18.7 -134.3 7.3 92.2 163.2 600.7
 GLU-140   ASP-141  18.3 18.4 -12.4 12.4 114.0 98.5 -30.0
 ASP-141   TYR-142  16.8 15.0 -132.7 4.1 38.6 84.2 307.8
 TYR-142   ASN-143  14.5 14.1 95.3 121.0 90.6 32.2 -478.5
 ASN-143   THR-144  15.9 12.1 118.7 -80.3 103.6 42.9 113.7
 THR-144   CYS-145  19.3 14.5 93.3 -103.7 174.0 46.5 42.2
 CYS-145   GLU-146  18.5 13.4 -106.7 3.1 59.9 111.1 -81.0
 GLU-146   GLY-147  16.7 10.8 140.0 175.3 85.0 133.4 192.3
 GLY-147   ALA-148  19.6 7.8 -35.2 -112.1 59.6 54.1 -660.7
 ALA-148   PHE-149  22.2 9.7 -6.6 -65.4 11.7 48.0 308.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LEU-172   ASN-173  29.8 34.2 48.0 -33.7 43.9 59.2 43.3
 ASN-173   ILE-174  29.2 31.9 1.9 -29.0 99.5 85.9 30.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PHE-183   LYS-184  13.4 16.5 -13.5 45.5 105.6 61.9 -56.7
 LYS-184   HIS-185  12.5 14.4 -24.9 4.4 166.8 129.0 -85.0
 HIS-185   SER-186  12.3 14.2 118.6 26.6 76.9 63.5 212.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees