Pc287 Immunoglobulin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-78   GLN-79  6.2 6.0 47.6 -43.2 71.0 73.3 35.5
 GLN-79   ALA-80  8.6 8.7 20.1 -30.3 15.6 11.5 -59.2
 ALA-80   GLU-81  8.9 9.8 24.1 -10.7 53.3 68.2 24.8
 GLU-81   ASP-82  10.3 11.0 4.5 -20.1 99.6 98.4 5.8
 ASP-82   LEU-83  8.0 7.8 13.2 -16.7 60.9 51.9 -22.2
 LEU-83   ALA-84  5.0 5.5 4.1 -13.6 38.7 47.5 -17.4
 ALA-84   ASP-85  5.6 5.9 -7.2 0.8 87.6 79.9 -1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-104   GLU-105  2.3 2.6 -17.5 25.2 113.5 108.9 -6.4
 GLU-105   LEU-106  1.5 1.2 -13.3 -17.4 43.6 33.9 112.2
 LEU-106   LYS-107  4.6 3.8 7.4 -11.8 96.7 95.1 13.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees