Hla Class I Histocompatibility Antigen, A-3 Alpha Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-175   LYS-176  13.4 12.9 10.6 -9.3 100.2 88.7 68.8
 LYS-176   GLU-177  11.4 11.0 5.2 -2.0 73.2 84.0 41.7
 GLU-177   THR-178  7.8 7.7 -33.5 27.0 168.0 155.8 -44.7
 THR-178   LEU-179  8.4 8.2 9.1 34.6 68.2 38.8 221.7
 LEU-179   GLN-180  11.0 9.3 173.5 30.6 110.1 76.8 -155.8
 GLN-180   ARG-181  10.9 7.0 91.5 -11.9 89.2 108.3 -440.6
 ARG-181   THR-182  7.8 7.7 28.8 87.5 39.7 66.9 469.2
 THR-182   ASP-183  8.4 8.4 6.8 -37.4 86.3 88.2 -42.3
 ASP-183   PRO-184  5.9 6.3 9.4 -3.7 51.0 52.8 49.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees