Rab Guanine Nucleotide Exchange Factor Sec2
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLN-45
LYS-46
7.7
6.3
21.1
31.8
59.2
60.5
21.8
LYS-46
ALA-47
5.3
6.1
-20.2
-0.6
161.9
135.0
-11.9
ALA-47
ALA-48
6.5
4.3
-11.6
8.5
91.8
71.9
-1.7
ALA-48
ILE-49
7.0
3.1
32.4
-33.7
86.9
122.8
2.1
ILE-49
GLU-50
4.0
0.8
-41.5
47.5
146.3
123.7
8.2
GLU-50
ASN-51
2.7
3.4
-11.9
12.0
135.8
120.8
-2.1
ASN-51
TYR-52
5.7
2.0
-1.5
-37.0
69.6
56.5
26.3
TYR-52
ASN-53
7.0
3.9
-9.5
6.6
135.6
75.3
-2.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees