Pyruvate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-70   GLU-71  3.5 3.7 -105.9 90.2 20.5 29.3 59.8
 GLU-71   ILE-72  5.8 6.0 -11.4 -18.0 91.6 90.3 37.2
 ILE-72   ARG-73  8.9 8.9 -2.2 5.5 56.3 49.0 -9.0
 ARG-73   THR-74  11.8 11.8 6.0 5.6 94.0 94.1 3.7
 THR-74   HIS-75  15.3 15.3 27.3 -9.2 50.6 49.9 44.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-122   LEU-123  9.9 9.5 -3.7 -13.0 60.6 64.7 36.2
 LEU-123   ASP-124  11.3 10.9 -4.0 13.2 111.5 117.0 30.2
 ASP-124   ASP-125  10.5 10.4 10.1 -3.7 55.7 56.2 -2.9
 ASP-125   GLY-126  6.8 6.9 -8.1 -7.8 30.8 50.5 48.8
 ASP-125   GLY-126  6.8 6.9 -8.1 -7.8 30.8 50.5 48.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-125   GLY-126  6.8 6.9 -8.1 -7.8 30.8 50.5 48.8
 ASP-125   GLY-126  6.8 6.9 -8.1 -7.8 30.8 50.5 48.8
 GLY-126   LEU-127  7.3 6.6 -1.3 -9.5 40.4 24.8 48.2
 LEU-127   ILE-128  10.0 8.9 8.0 20.4 113.3 101.0 -23.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-155   LYS-156  16.0 15.9 -17.8 21.2 121.7 122.9 -10.2
 LYS-156   GLY-157  13.4 13.3 -4.9 15.3 72.7 64.1 -34.5
 GLY-157   VAL-158  9.9 9.6 -15.5 14.4 113.5 111.1 1.9
 VAL-158   ASN-159  9.5 9.2 -6.5 14.1 83.5 83.3 -27.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-165   SER-166  9.1 9.7 -2.9 -14.2 9.6 31.9 96.0
 SER-166   LEU-167  9.7 9.3 54.8 -56.1 124.3 120.6 21.5
 LEU-167   PRO-168  6.6 6.3 -17.1 10.9 46.9 63.2 -20.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees