Hiv-2 Protease
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-30
SER-31
8.5
8.3
-7.4
14.7
141.0
141.1
41.7
SER-31
ILE-32
5.3
5.3
-9.3
18.9
83.0
84.4
-34.2
ILE-32
VAL-33
2.6
2.8
2.3
1.4
38.6
44.1
19.3
VAL-33
ALA-34
1.1
1.1
-4.4
-0.4
83.5
89.2
23.3
ALA-34
GLY-35
4.8
4.7
-14.3
-10.5
102.5
101.4
-33.9
GLY-35
ILE-36
7.8
7.7
29.8
-20.4
123.4
109.9
66.3
ILE-36
GLU-37
7.6
7.7
15.5
-7.4
144.9
150.4
-67.5
GLU-37
LEU-38
9.8
9.4
25.9
-20.5
134.8
134.8
-50.4
LEU-38
GLY-39
8.5
8.2
6.7
-16.6
159.0
155.8
131.4
GLY-39
ASN-40
10.0
10.1
4.7
14.5
128.7
127.8
-111.6
ASN-40
ASN-41
9.6
9.9
3.0
-16.6
134.8
127.7
68.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-56
LYS-57
7.2
7.1
-3.8
6.9
145.8
144.3
8.5
LYS-57
GLU-58
5.1
5.1
-6.9
2.9
88.1
91.1
25.1
GLU-58
TYR-59
1.7
1.8
-1.7
0.8
117.9
118.9
25.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-72
ALA-73
11.7
11.7
-12.4
16.3
84.7
91.0
-29.6
ALA-73
THR-74
8.8
8.9
2.1
-3.3
102.8
104.8
-40.9
THR-74
ILE-75
5.4
5.6
-22.8
37.6
151.9
148.7
111.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-82
ASN-83
4.1
3.6
14.9
-4.0
31.6
30.3
84.5
ASN-83
ILE-84
1.6
1.4
18.2
-19.2
88.3
88.1
56.3
ILE-84
PHE-85
5.0
4.8
-5.1
0.7
134.1
134.8
-45.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees