C-X-C Chemokine Receptor Type 4, Lysozyme Chimera

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-224   LYS-225  10.1 9.7 -22.5 55.4 43.7 41.7 -21.5
 LYS-225   LEU-226  7.2 6.6 -41.4 -0.2 38.0 32.1 33.3
 LEU-226   SER-227  7.8 8.6 -0.4 -6.9 25.4 58.6 4.2
 SER-227   HIS-228  9.0 11.0 -1.4 42.6 71.3 70.5 -19.4
 ASN-1002   ILE-1003  6.0 6.8 147.1 14.1 138.6 141.3 165.5
 ILE-1003   PHE-1004  9.3 10.0 -19.3 7.1 75.4 73.3 10.0
 PHE-1004   GLU-1005  10.5 11.2 12.4 -10.7 134.2 124.9 -0.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-1159   ALA-1160  4.3 4.6 -1.4 -0.5 139.8 133.1 -1.5
 ALA-1160   TYR-1161  2.4 2.2 22.3 -30.8 104.0 117.1 7.9
 HIS-232   GLN-233  12.5 8.9 -173.6 118.6 50.1 67.7 39.2
 GLN-233   LYS-234  13.8 11.1 118.1 -83.9 155.3 174.4 -37.9
 LYS-234   ARG-235  11.2 10.3 88.5 -3.5 113.6 118.4 -28.0
 ARG-235   LYS-236  12.8 11.2 161.6 -57.3 105.4 163.4 -64.1
 LYS-236   ALA-237  16.1 11.4 148.5 -29.2 150.6 103.7 206.7
 ALA-237   LEU-238  14.9 13.8 -171.8 -43.3 41.6 14.9 -125.9
 LEU-238   LYS-239  13.5 14.2 0.1 18.9 103.7 101.4 6.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees