Carbamoyl Phosphate Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-690   ALA-691  3.7 3.6 -37.2 15.4 39.4 41.0 61.3
 ALA-691   ASN-692  1.3 1.3 18.0 17.5 70.6 68.5 57.9
 ASN-692   ALA-693  2.4 2.5 12.1 -33.8 143.0 133.7 57.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-714   ARG-715  8.1 7.8 -32.4 36.0 75.1 75.7 -51.3
 ARG-715   PRO-716  9.2 9.1 18.2 0.0 60.9 54.4 43.4
 ALA-724   MET-725  13.3 12.3 159.4 -91.0 63.5 61.5 171.8
 MET-725   GLU-726  9.7 8.7 -9.8 11.6 64.6 69.4 -25.0
 GLU-726   ILE-727  8.1 7.8 7.7 -23.9 56.2 57.8 -37.3
 ILE-727   VAL-728  6.1 6.1 -13.4 14.2 100.4 97.4 8.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-752   ASP-753  6.4 6.2 32.5 -36.0 84.6 89.7 28.1
 ASP-753   HIS-754  2.8 2.6 10.6 -6.7 112.2 116.6 -19.1
 HIS-754   PHE-755  2.0 2.4 -3.3 -14.8 33.3 31.4 64.0
 PHE-755   LEU-756  2.4 2.4 -10.5 16.8 91.8 86.8 21.2
 LEU-756   ASP-757  4.6 5.0 -3.4 -10.3 27.8 24.2 45.2
 ASP-757   ASP-758  7.0 6.8 -1.0 14.9 76.2 75.7 -49.2
 ASP-758   ALA-759  9.4 9.3 -2.1 -1.5 115.2 114.0 2.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees