1,25-Dihydroxyvitamin D(3) 24-Hydroxylase, Mitochondrial

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-54   VAL-55  11.9 11.3 -10.1 -11.3 82.5 69.7 115.3
 VAL-55   THR-56  8.6 8.3 -0.4 -2.0 132.1 125.0 -28.4
 THR-56   ASP-57  7.9 7.2 6.3 3.5 38.4 37.7 78.1
 ASP-57   LEU-58  7.7 6.8 -7.1 1.0 78.9 76.0 -12.6
 LEU-58   PRO-59  5.8 5.2 1.0 0.2 61.8 68.8 34.2
 PRO-59   GLY-60  3.8 3.4 1.0 7.2 135.4 139.8 -39.3
 GLY-60   PRO-61  3.1 3.0 0.6 2.0 70.6 69.5 60.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-69   LEU-70  8.8 8.7 26.8 8.8 52.9 44.8 201.6
 LEU-70   LEU-71  11.5 10.9 -10.3 0.7 59.4 72.4 11.9
 LEU-71   GLU-72  14.0 14.0 6.1 3.6 108.4 109.3 -34.6
 GLU-72   ILE-73  13.4 12.8 2.0 10.9 44.6 40.7 49.0
 ILE-73   PHE-74  14.1 12.6 -3.1 -9.7 106.4 108.7 -24.5
 PHE-74   TRP-75  17.1 16.1 -21.6 50.3 46.3 48.1 -170.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-95   ILE-96  12.6 12.4 4.3 -2.3 126.7 125.0 -32.1
 ILE-96   PHE-97  9.5 9.3 1.1 -2.3 64.5 63.3 4.4
 PHE-97   ARG-98  5.8 5.6 -2.8 9.6 47.4 46.0 -27.0
 ARG-98   MET-99  2.4 2.1 10.6 4.0 90.5 95.8 29.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-105   SER-106  2.6 2.9 2.0 -1.3 72.4 73.6 -21.6
 SER-106   VAL-107  1.4 1.5 -10.2 0.2 39.5 35.7 71.0
 VAL-107   HIS-108  4.7 4.6 2.6 -1.8 71.6 72.6 -21.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees