Aspartyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-424   ASP-425  5.8 5.5 -10.0 2.0 81.5 88.6 15.1
 ASP-425   PHE-426  9.2 8.8 14.0 -14.5 92.5 88.3 56.9
 PHE-426   PRO-427  9.4 9.4 -2.5 9.2 49.3 48.8 -26.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-441   HIS-442  12.2 12.6 -11.8 4.0 93.2 102.3 31.8
 HIS-442   HIS-443  9.3 9.6 -11.6 23.1 150.5 158.0 162.0
 HIS-443   PRO-444  9.6 8.8 -11.4 -11.3 127.6 123.0 -191.0
 PRO-444   PHE-445  10.1 9.9 8.0 -5.8 72.3 68.3 23.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-464   ALA-465  13.2 12.8 2.5 21.8 48.1 43.0 127.2
 ALA-465   LEU-466  9.7 9.6 11.0 -19.7 109.2 106.1 14.0
 LEU-466   ALA-467  7.2 7.2 0.6 -11.7 103.2 97.1 26.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-482   ARG-483  3.8 4.0 2.9 -12.4 134.5 133.8 48.7
 ARG-483   ILE-484  3.4 3.6 -1.3 4.1 54.8 48.7 -47.8
 ILE-484   HIS-485  6.2 6.2 -7.3 2.7 38.1 37.0 -19.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-500   GLU-501  19.4 18.5 23.5 -32.5 47.8 58.8 -89.4
 GLU-501   GLU-502  17.0 16.2 20.2 11.4 71.0 84.3 72.2
 GLU-502   GLU-503  17.9 18.1 -45.8 19.9 53.0 49.5 137.6
 GLU-503   GLN-504  17.7 17.2 0.5 2.5 98.9 93.4 -46.3
 GLN-504   ARG-505  14.1 13.8 -25.2 19.3 45.1 51.8 47.1
 GLN-504   ARG-505  14.1 13.8 -25.2 19.3 45.1 51.8 47.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-504   ARG-505  14.1 13.8 -25.2 19.3 45.1 51.8 47.1
 GLN-504   ARG-505  14.1 13.8 -25.2 19.3 45.1 51.8 47.1
 ARG-505   GLU-506  13.4 12.9 -20.1 16.8 93.5 106.6 54.5
 GLU-506   LYS-507  15.5 15.3 32.2 -32.2 37.8 30.3 2.2
 LYS-507   PHE-508  14.3 13.6 0.2 12.1 95.2 91.1 8.4
 LYS-507   PHE-508  14.3 13.6 0.2 12.1 95.2 91.1 8.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-507   PHE-508  14.3 13.6 0.2 12.1 95.2 91.1 8.4
 LYS-507   PHE-508  14.3 13.6 0.2 12.1 95.2 91.1 8.4
 PHE-508   GLY-509  10.6 9.9 -3.9 25.7 143.7 156.4 200.0
 GLY-509   PHE-510  9.8 9.7 -33.0 4.7 97.6 101.0 -38.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees